Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
TPM2P07951 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC18.08■□□□□ 0.49
TPM2P07951 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
TPM2P07951 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.08■□□□□ 0.48
TPM2P07951 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TPM2P07951 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.08■□□□□ 0.48
TPM2P07951 DUSP5P1-201ENST00000441325 1139 ntBASIC18.08■□□□□ 0.48
TPM2P07951 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.08■□□□□ 0.48
TPM2P07951 RNPS1P1-201ENST00000507437 918 ntBASIC18.08■□□□□ 0.48
TPM2P07951 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.08■□□□□ 0.48
TPM2P07951 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.08■□□□□ 0.48
TPM2P07951 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.08■□□□□ 0.48
TPM2P07951 RIN3-211ENST00000557762 517 ntTSL 3 BASIC18.08■□□□□ 0.48
TPM2P07951 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.08■□□□□ 0.48
TPM2P07951 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TPM2P07951 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.08■□□□□ 0.48
TPM2P07951 AC021097.1-201ENST00000607902 574 ntBASIC18.08■□□□□ 0.48
TPM2P07951 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TPM2P07951 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TPM2P07951 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
TPM2P07951 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TPM2P07951 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TPM2P07951 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TPM2P07951 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TPM2P07951 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TPM2P07951 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
TPM2P07951 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
TPM2P07951 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
TPM2P07951 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
TPM2P07951 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.08■□□□□ 0.48
TPM2P07951 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC18.08■□□□□ 0.48
TPM2P07951 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TPM2P07951 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM2P07951 MYO15B-237ENST00000642007 4893 ntBASIC18.07■□□□□ 0.48
TPM2P07951 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM2P07951 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM2P07951 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TPM2P07951 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC18.07■□□□□ 0.48
TPM2P07951 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM2P07951 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.07■□□□□ 0.48
TPM2P07951 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TPM2P07951 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM2P07951 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TPM2P07951 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.07■□□□□ 0.48
TPM2P07951 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC18.07■□□□□ 0.48
TPM2P07951 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM2P07951 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM2P07951 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.07■□□□□ 0.48
TPM2P07951 AC005622.1-201ENST00000636801 1703 ntBASIC18.07■□□□□ 0.48
TPM2P07951 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
TPM2P07951 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TPM2P07951 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM2P07951 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC18.07■□□□□ 0.48
TPM2P07951 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.07■□□□□ 0.48
TPM2P07951 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM2P07951 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM2P07951 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TPM2P07951 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TPM2P07951 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TPM2P07951 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
TPM2P07951 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.07■□□□□ 0.48
TPM2P07951 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM2P07951 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM2P07951 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.07■□□□□ 0.48
TPM2P07951 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.07■□□□□ 0.48
TPM2P07951 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.07■□□□□ 0.48
TPM2P07951 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TPM2P07951 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM2P07951 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TPM2P07951 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC18.07■□□□□ 0.48
TPM2P07951 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM2P07951 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC18.07■□□□□ 0.48
TPM2P07951 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM2P07951 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TPM2P07951 U82695.1-201ENST00000635752 1889 ntBASIC18.07■□□□□ 0.48
TPM2P07951 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC18.07■□□□□ 0.48
TPM2P07951 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TPM2P07951 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
TPM2P07951 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TPM2P07951 AC027612.1-201ENST00000445234 2395 ntBASIC18.06■□□□□ 0.48
TPM2P07951 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.06■□□□□ 0.48
TPM2P07951 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
TPM2P07951 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
TPM2P07951 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TPM2P07951 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
TPM2P07951 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TPM2P07951 AC027601.5-201ENST00000624065 2482 ntBASIC18.06■□□□□ 0.48
TPM2P07951 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TPM2P07951 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TPM2P07951 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
TPM2P07951 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TPM2P07951 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
TPM2P07951 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TPM2P07951 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TPM2P07951 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
TPM2P07951 AF186996.4-201ENST00000467186 377 ntBASIC18.06■□□□□ 0.48
TPM2P07951 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.06■□□□□ 0.48
TPM2P07951 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TPM2P07951 TOLLIP-AS1-201ENST00000530897 939 ntBASIC18.06■□□□□ 0.48
TPM2P07951 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms