Protein–RNA interactions for Protein: P07333

CSF1R, Macrophage colony-stimulating factor 1 receptor, humanhuman

Predictions only

Length 972 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1RP07333 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSF1RP07333 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC19.18■□□□□ 0.66
CSF1RP07333 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CSF1RP07333 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC19.18■□□□□ 0.66
CSF1RP07333 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC19.18■□□□□ 0.66
CSF1RP07333 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSF1RP07333 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
CSF1RP07333 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSF1RP07333 AC006001.1-201ENST00000325130 474 ntBASIC19.18■□□□□ 0.66
CSF1RP07333 ACTBP8-201ENST00000403258 1108 ntBASIC19.18■□□□□ 0.66
CSF1RP07333 KLF2P2-201ENST00000416807 1039 ntBASIC19.18■□□□□ 0.66
CSF1RP07333 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC19.18■□□□□ 0.66
CSF1RP07333 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC19.18■□□□□ 0.66
CSF1RP07333 RPL8-205ENST00000527914 551 ntTSL 3 BASIC19.18■□□□□ 0.66
CSF1RP07333 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC19.18■□□□□ 0.66
CSF1RP07333 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CSF1RP07333 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC19.18■□□□□ 0.66
CSF1RP07333 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CSF1RP07333 TECR-220ENST00000600083 1204 ntTSL 2 BASIC19.18■□□□□ 0.66
CSF1RP07333 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC19.18■□□□□ 0.66
CSF1RP07333 RHOXF1P1-202ENST00000635473 501 ntBASIC19.18■□□□□ 0.66
CSF1RP07333 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CSF1RP07333 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSF1RP07333 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSF1RP07333 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSF1RP07333 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSF1RP07333 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.18■□□□□ 0.66
CSF1RP07333 KRT8P35-201ENST00000483942 1338 ntBASIC19.18■□□□□ 0.66
CSF1RP07333 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC19.18■□□□□ 0.66
CSF1RP07333 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSF1RP07333 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSF1RP07333 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSF1RP07333 HCG11-201ENST00000411553 5696 ntBASIC19.18■□□□□ 0.66
CSF1RP07333 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
CSF1RP07333 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC19.18■□□□□ 0.66
CSF1RP07333 AL365203.3-201ENST00000609742 2057 ntBASIC19.18■□□□□ 0.66
CSF1RP07333 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSF1RP07333 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSF1RP07333 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CSF1RP07333 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSF1RP07333 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSF1RP07333 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC19.17■□□□□ 0.66
CSF1RP07333 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSF1RP07333 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC19.17■□□□□ 0.66
CSF1RP07333 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSF1RP07333 AC148477.4-201ENST00000613430 1793 ntBASIC19.17■□□□□ 0.66
CSF1RP07333 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSF1RP07333 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSF1RP07333 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC19.17■□□□□ 0.66
CSF1RP07333 RNU1-114P-201ENST00000365297 166 ntBASIC19.17■□□□□ 0.66
CSF1RP07333 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSF1RP07333 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
CSF1RP07333 NUS1P3-201ENST00000423502 862 ntBASIC19.17■□□□□ 0.66
CSF1RP07333 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC19.17■□□□□ 0.66
CSF1RP07333 KRT18P25-201ENST00000508931 1278 ntBASIC19.17■□□□□ 0.66
CSF1RP07333 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CSF1RP07333 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC19.17■□□□□ 0.66
CSF1RP07333 LARP4-220ENST00000615080 856 ntTSL 5 BASIC19.17■□□□□ 0.66
CSF1RP07333 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC19.17■□□□□ 0.66
CSF1RP07333 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSF1RP07333 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.17■□□□□ 0.66
CSF1RP07333 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSF1RP07333 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC19.17■□□□□ 0.66
CSF1RP07333 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSF1RP07333 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSF1RP07333 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CSF1RP07333 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSF1RP07333 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CSF1RP07333 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC19.17■□□□□ 0.66
CSF1RP07333 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CSF1RP07333 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CSF1RP07333 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
CSF1RP07333 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSF1RP07333 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC19.16■□□□□ 0.66
CSF1RP07333 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.16■□□□□ 0.66
CSF1RP07333 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CSF1RP07333 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
CSF1RP07333 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
CSF1RP07333 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSF1RP07333 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSF1RP07333 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CSF1RP07333 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CSF1RP07333 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC19.16■□□□□ 0.66
CSF1RP07333 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CSF1RP07333 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC19.16■□□□□ 0.66
CSF1RP07333 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSF1RP07333 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CSF1RP07333 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSF1RP07333 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC19.16■□□□□ 0.66
CSF1RP07333 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC19.16■□□□□ 0.66
CSF1RP07333 B9D1-203ENST00000395615 805 ntTSL 3 BASIC19.16■□□□□ 0.66
CSF1RP07333 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC19.16■□□□□ 0.66
CSF1RP07333 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC19.16■□□□□ 0.66
CSF1RP07333 MIR1908-201ENST00000410394 80 ntBASIC19.16■□□□□ 0.66
CSF1RP07333 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CSF1RP07333 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CSF1RP07333 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC19.16■□□□□ 0.66
CSF1RP07333 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC19.16■□□□□ 0.66
CSF1RP07333 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC19.16■□□□□ 0.66
CSF1RP07333 AC092658.1-201ENST00000505836 891 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms