Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 ACE3P-201ENST00000423435 1973 ntBASIC16.97■□□□□ 0.31
TUBB4AP04350 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.97■□□□□ 0.31
TUBB4AP04350 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.97■□□□□ 0.31
TUBB4AP04350 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBB4AP04350 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
TUBB4AP04350 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBB4AP04350 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
TUBB4AP04350 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TUBB4AP04350 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TUBB4AP04350 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.97■□□□□ 0.31
TUBB4AP04350 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
TUBB4AP04350 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.97■□□□□ 0.31
TUBB4AP04350 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TUBB4AP04350 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TUBB4AP04350 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.97■□□□□ 0.31
TUBB4AP04350 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
TUBB4AP04350 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.97■□□□□ 0.31
TUBB4AP04350 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.97■□□□□ 0.31
TUBB4AP04350 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC16.97■□□□□ 0.31
TUBB4AP04350 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.97■□□□□ 0.31
TUBB4AP04350 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBB4AP04350 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.97■□□□□ 0.31
TUBB4AP04350 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBB4AP04350 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TUBB4AP04350 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBB4AP04350 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TUBB4AP04350 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.97■□□□□ 0.31
TUBB4AP04350 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
TUBB4AP04350 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC16.97■□□□□ 0.31
TUBB4AP04350 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TUBB4AP04350 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TUBB4AP04350 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TUBB4AP04350 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
TUBB4AP04350 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.96■□□□□ 0.31
TUBB4AP04350 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.96■□□□□ 0.31
TUBB4AP04350 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBB4AP04350 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBB4AP04350 AC113367.3-201ENST00000508316 1912 ntBASIC16.96■□□□□ 0.31
TUBB4AP04350 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
TUBB4AP04350 AL928921.2-201ENST00000641325 2442 ntBASIC16.96■□□□□ 0.31
TUBB4AP04350 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC16.96■□□□□ 0.31
TUBB4AP04350 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
TUBB4AP04350 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
TUBB4AP04350 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBB4AP04350 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TUBB4AP04350 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBB4AP04350 TSSC2-201ENST00000450217 709 ntBASIC16.96■□□□□ 0.31
TUBB4AP04350 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBB4AP04350 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.96■□□□□ 0.31
TUBB4AP04350 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.96■□□□□ 0.31
TUBB4AP04350 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.96■□□□□ 0.31
TUBB4AP04350 AC074051.2-201ENST00000565115 352 ntBASIC16.96■□□□□ 0.31
TUBB4AP04350 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.96■□□□□ 0.31
TUBB4AP04350 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBB4AP04350 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TUBB4AP04350 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBB4AP04350 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBB4AP04350 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBB4AP04350 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TUBB4AP04350 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBB4AP04350 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
TUBB4AP04350 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TUBB4AP04350 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
TUBB4AP04350 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBB4AP04350 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBB4AP04350 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.96■□□□□ 0.31
TUBB4AP04350 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
TUBB4AP04350 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBB4AP04350 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBB4AP04350 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TUBB4AP04350 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
TUBB4AP04350 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.96■□□□□ 0.3
TUBB4AP04350 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TUBB4AP04350 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TUBB4AP04350 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TUBB4AP04350 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC16.96■□□□□ 0.3
TUBB4AP04350 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC16.96■□□□□ 0.3
TUBB4AP04350 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
TUBB4AP04350 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.96■□□□□ 0.3
TUBB4AP04350 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC16.96■□□□□ 0.3
TUBB4AP04350 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TUBB4AP04350 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TUBB4AP04350 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.95■□□□□ 0.3
TUBB4AP04350 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC16.95■□□□□ 0.3
TUBB4AP04350 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TUBB4AP04350 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TUBB4AP04350 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.95■□□□□ 0.3
TUBB4AP04350 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TUBB4AP04350 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TUBB4AP04350 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TUBB4AP04350 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TUBB4AP04350 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.95■□□□□ 0.3
TUBB4AP04350 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
TUBB4AP04350 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TUBB4AP04350 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC16.95■□□□□ 0.3
TUBB4AP04350 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.95■□□□□ 0.3
TUBB4AP04350 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TUBB4AP04350 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TUBB4AP04350 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TUBB4AP04350 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms