Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC9.57□□□□□ -0.88
APOBP04114 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
APOBP04114 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
APOBP04114 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
APOBP04114 AL008707.1-201ENST00000422498 534 ntBASIC9.57□□□□□ -0.88
APOBP04114 VDAC1P1-201ENST00000439229 848 ntBASIC9.57□□□□□ -0.88
APOBP04114 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC9.57□□□□□ -0.88
APOBP04114 AL133466.1-201ENST00000447582 150 ntBASIC9.57□□□□□ -0.88
APOBP04114 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
APOBP04114 AC008805.1-201ENST00000590892 364 ntBASIC9.57□□□□□ -0.88
APOBP04114 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC9.57□□□□□ -0.88
APOBP04114 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
APOBP04114 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC9.57□□□□□ -0.88
APOBP04114 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
APOBP04114 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
APOBP04114 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
APOBP04114 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
APOBP04114 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC9.57□□□□□ -0.88
APOBP04114 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC9.57□□□□□ -0.88
APOBP04114 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
APOBP04114 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
APOBP04114 AK6-201ENST00000380818 1183 ntTSL 2 BASIC9.57□□□□□ -0.88
APOBP04114 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC9.57□□□□□ -0.88
APOBP04114 AC090164.2-201ENST00000611487 516 ntBASIC9.57□□□□□ -0.88
APOBP04114 AC009090.5-201ENST00000624886 2285 ntBASIC9.57□□□□□ -0.88
APOBP04114 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
APOBP04114 AC012313.1-201ENST00000593393 3059 ntBASIC9.57□□□□□ -0.88
APOBP04114 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
APOBP04114 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
APOBP04114 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC9.56□□□□□ -0.88
APOBP04114 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
APOBP04114 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC9.56□□□□□ -0.88
APOBP04114 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC9.56□□□□□ -0.88
APOBP04114 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC9.56□□□□□ -0.88
APOBP04114 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC9.56□□□□□ -0.88
APOBP04114 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
APOBP04114 OR10B1P-201ENST00000601666 907 ntBASIC9.56□□□□□ -0.88
APOBP04114 AP001527.2-201ENST00000614441 631 ntBASIC9.56□□□□□ -0.88
APOBP04114 PLS3-210ENST00000626746 216 ntTSL 4 BASIC9.56□□□□□ -0.88
APOBP04114 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC9.56□□□□□ -0.88
APOBP04114 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC9.56□□□□□ -0.88
APOBP04114 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
APOBP04114 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC9.56□□□□□ -0.88
APOBP04114 EML3-212ENST00000494176 2901 ntTSL 2 BASIC9.56□□□□□ -0.88
APOBP04114 EML3-216ENST00000529309 2909 ntTSL 2 BASIC9.56□□□□□ -0.88
APOBP04114 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
APOBP04114 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
APOBP04114 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC9.56□□□□□ -0.88
APOBP04114 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
APOBP04114 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC9.56□□□□□ -0.88
APOBP04114 HLA-J-204ENST00000495278 958 ntBASIC9.56□□□□□ -0.88
APOBP04114 NSD1-211ENST00000511258 809 ntTSL 3 BASIC9.56□□□□□ -0.88
APOBP04114 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC9.56□□□□□ -0.88
APOBP04114 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
APOBP04114 AC005041.3-201ENST00000606287 649 ntBASIC9.56□□□□□ -0.88
APOBP04114 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
APOBP04114 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
APOBP04114 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC9.56□□□□□ -0.88
APOBP04114 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
APOBP04114 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
APOBP04114 AC136759.1-202ENST00000530858 2194 ntBASIC9.56□□□□□ -0.88
APOBP04114 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
APOBP04114 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC9.56□□□□□ -0.88
APOBP04114 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
APOBP04114 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
APOBP04114 DDX39AP1-201ENST00000445147 1181 ntBASIC9.56□□□□□ -0.88
APOBP04114 NOC2LP1-201ENST00000450578 752 ntBASIC9.56□□□□□ -0.88
APOBP04114 AC079112.1-201ENST00000454972 939 ntBASIC9.56□□□□□ -0.88
APOBP04114 AGPAT5P1-201ENST00000455855 1019 ntBASIC9.56□□□□□ -0.88
APOBP04114 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC9.56□□□□□ -0.88
APOBP04114 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC9.56□□□□□ -0.88
APOBP04114 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC9.56□□□□□ -0.88
APOBP04114 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC9.56□□□□□ -0.88
APOBP04114 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC9.56□□□□□ -0.88
APOBP04114 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
APOBP04114 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC9.56□□□□□ -0.88
APOBP04114 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
APOBP04114 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC9.56□□□□□ -0.88
APOBP04114 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
APOBP04114 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC9.56□□□□□ -0.88
APOBP04114 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
APOBP04114 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
APOBP04114 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC9.56□□□□□ -0.88
APOBP04114 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
APOBP04114 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
APOBP04114 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
APOBP04114 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
APOBP04114 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
APOBP04114 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC9.56□□□□□ -0.88
APOBP04114 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
APOBP04114 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC9.56□□□□□ -0.88
APOBP04114 ISCA2P1-201ENST00000425548 448 ntBASIC9.56□□□□□ -0.88
APOBP04114 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC9.56□□□□□ -0.88
APOBP04114 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
APOBP04114 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC9.56□□□□□ -0.88
APOBP04114 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC9.56□□□□□ -0.88
APOBP04114 NAP1L6-202ENST00000641404 1222 ntBASIC9.56□□□□□ -0.88
APOBP04114 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
APOBP04114 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC9.56□□□□□ -0.88
APOBP04114 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms