Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TOP3BO95985 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.24■□□□□ 0.19
TOP3BO95985 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.24■□□□□ 0.19
TOP3BO95985 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.24■□□□□ 0.19
TOP3BO95985 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.24■□□□□ 0.19
TOP3BO95985 POLE2-203ENST00000553805 496 ntTSL 2 BASIC16.24■□□□□ 0.19
TOP3BO95985 MPI-209ENST00000564003 1195 ntTSL 2 BASIC16.24■□□□□ 0.19
TOP3BO95985 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC16.24■□□□□ 0.19
TOP3BO95985 U1.21-201ENST00000580816 167 ntBASIC16.24■□□□□ 0.19
TOP3BO95985 MIR4259-201ENST00000584466 101 ntBASIC16.24■□□□□ 0.19
TOP3BO95985 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TOP3BO95985 AC027307.2-201ENST00000591252 911 ntBASIC16.24■□□□□ 0.19
TOP3BO95985 AC008738.7-201ENST00000609744 511 ntBASIC16.24■□□□□ 0.19
TOP3BO95985 AL162274.1-201ENST00000617191 1098 ntBASIC16.24■□□□□ 0.19
TOP3BO95985 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.24■□□□□ 0.19
TOP3BO95985 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TOP3BO95985 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TOP3BO95985 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC16.24■□□□□ 0.19
TOP3BO95985 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.24■□□□□ 0.19
TOP3BO95985 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TOP3BO95985 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
TOP3BO95985 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TOP3BO95985 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TOP3BO95985 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TOP3BO95985 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.24■□□□□ 0.19
TOP3BO95985 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
TOP3BO95985 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TOP3BO95985 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.24■□□□□ 0.19
TOP3BO95985 LINC02228-204ENST00000642115 2962 ntBASIC16.23■□□□□ 0.19
TOP3BO95985 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.23■□□□□ 0.19
TOP3BO95985 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TOP3BO95985 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.23■□□□□ 0.19
TOP3BO95985 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TOP3BO95985 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TOP3BO95985 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.23■□□□□ 0.19
TOP3BO95985 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.23■□□□□ 0.19
TOP3BO95985 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TOP3BO95985 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TOP3BO95985 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
TOP3BO95985 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TOP3BO95985 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TOP3BO95985 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.23■□□□□ 0.19
TOP3BO95985 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TOP3BO95985 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.23■□□□□ 0.19
TOP3BO95985 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.23■□□□□ 0.19
TOP3BO95985 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.23■□□□□ 0.19
TOP3BO95985 KRT17P8-201ENST00000540749 863 ntBASIC16.23■□□□□ 0.19
TOP3BO95985 AC140912.1-201ENST00000577171 1054 ntBASIC16.23■□□□□ 0.19
TOP3BO95985 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
TOP3BO95985 AL033527.4-201ENST00000641026 673 ntBASIC16.23■□□□□ 0.19
TOP3BO95985 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.23■□□□□ 0.19
TOP3BO95985 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.23■□□□□ 0.19
TOP3BO95985 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TOP3BO95985 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.23■□□□□ 0.19
TOP3BO95985 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.23■□□□□ 0.19
TOP3BO95985 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TOP3BO95985 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TOP3BO95985 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TOP3BO95985 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.23■□□□□ 0.19
TOP3BO95985 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TOP3BO95985 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TOP3BO95985 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TOP3BO95985 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TOP3BO95985 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TOP3BO95985 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TOP3BO95985 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TOP3BO95985 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.22■□□□□ 0.19
TOP3BO95985 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TOP3BO95985 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TOP3BO95985 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TOP3BO95985 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TOP3BO95985 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.22■□□□□ 0.19
TOP3BO95985 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TOP3BO95985 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TOP3BO95985 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.22■□□□□ 0.19
TOP3BO95985 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TOP3BO95985 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.22■□□□□ 0.19
TOP3BO95985 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TOP3BO95985 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TOP3BO95985 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TOP3BO95985 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.22■□□□□ 0.19
TOP3BO95985 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TOP3BO95985 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.22■□□□□ 0.19
TOP3BO95985 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.22■□□□□ 0.19
TOP3BO95985 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.22■□□□□ 0.19
TOP3BO95985 AC022210.1-201ENST00000449856 793 ntBASIC16.22■□□□□ 0.19
TOP3BO95985 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TOP3BO95985 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.22■□□□□ 0.19
TOP3BO95985 PARP8-218ENST00000513738 596 ntTSL 4 BASIC16.22■□□□□ 0.19
TOP3BO95985 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TOP3BO95985 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.22■□□□□ 0.19
TOP3BO95985 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.22■□□□□ 0.19
TOP3BO95985 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.22■□□□□ 0.19
TOP3BO95985 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TOP3BO95985 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TOP3BO95985 REXO1L6P-201ENST00000603433 1515 ntBASIC16.22■□□□□ 0.19
TOP3BO95985 SSR4P1-203ENST00000599569 2260 ntBASIC16.22■□□□□ 0.19
TOP3BO95985 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TOP3BO95985 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TOP3BO95985 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms