Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
USH2AO75445 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC6.86□□□□□ -1.31
USH2AO75445 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC6.86□□□□□ -1.31
USH2AO75445 AC093752.3-201ENST00000567343 901 ntBASIC6.86□□□□□ -1.31
USH2AO75445 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
USH2AO75445 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC6.86□□□□□ -1.31
USH2AO75445 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
USH2AO75445 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
USH2AO75445 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC6.86□□□□□ -1.31
USH2AO75445 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC6.86□□□□□ -1.31
USH2AO75445 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
USH2AO75445 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC6.86□□□□□ -1.31
USH2AO75445 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
USH2AO75445 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
USH2AO75445 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC6.86□□□□□ -1.31
USH2AO75445 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC6.86□□□□□ -1.31
USH2AO75445 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC6.86□□□□□ -1.31
USH2AO75445 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC6.86□□□□□ -1.31
USH2AO75445 NDUFAB1P1-201ENST00000404262 460 ntBASIC6.86□□□□□ -1.31
USH2AO75445 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC6.86□□□□□ -1.31
USH2AO75445 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC6.86□□□□□ -1.31
USH2AO75445 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC6.86□□□□□ -1.31
USH2AO75445 AC090857.1-201ENST00000527400 390 ntBASIC6.86□□□□□ -1.31
USH2AO75445 DUT-207ENST00000559416 635 ntTSL 2 BASIC6.86□□□□□ -1.31
USH2AO75445 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
USH2AO75445 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
USH2AO75445 AC103810.10-201ENST00000606504 343 ntBASIC6.86□□□□□ -1.31
USH2AO75445 AC090164.3-201ENST00000610780 2143 ntBASIC6.86□□□□□ -1.31
USH2AO75445 CR392039.1-201ENST00000623217 204 ntBASIC6.86□□□□□ -1.31
USH2AO75445 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
USH2AO75445 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
USH2AO75445 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
USH2AO75445 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
USH2AO75445 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC6.86□□□□□ -1.31
USH2AO75445 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
USH2AO75445 AL138688.1-201ENST00000624851 1594 ntBASIC6.86□□□□□ -1.31
USH2AO75445 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
USH2AO75445 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
USH2AO75445 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
USH2AO75445 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
USH2AO75445 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
USH2AO75445 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
USH2AO75445 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
USH2AO75445 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
USH2AO75445 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC6.86□□□□□ -1.31
USH2AO75445 AC239868.1-201ENST00000369385 493 ntBASIC6.86□□□□□ -1.31
USH2AO75445 MIR566-201ENST00000385187 94 ntBASIC6.86□□□□□ -1.31
USH2AO75445 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
USH2AO75445 AC244197.1-201ENST00000456494 951 ntBASIC6.86□□□□□ -1.31
USH2AO75445 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC6.86□□□□□ -1.31
USH2AO75445 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC6.86□□□□□ -1.31
USH2AO75445 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC6.86□□□□□ -1.31
USH2AO75445 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC6.86□□□□□ -1.31
USH2AO75445 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC6.86□□□□□ -1.31
USH2AO75445 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC6.86□□□□□ -1.31
USH2AO75445 CADM1-221ENST00000612235 1042 ntTSL 5 BASIC6.86□□□□□ -1.31
USH2AO75445 AC011471.3-201ENST00000623576 402 ntBASIC6.86□□□□□ -1.31
USH2AO75445 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
USH2AO75445 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
USH2AO75445 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
USH2AO75445 PCGF3-213ENST00000620529 1899 ntBASIC6.86□□□□□ -1.31
USH2AO75445 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
USH2AO75445 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
USH2AO75445 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
USH2AO75445 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
USH2AO75445 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
USH2AO75445 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC6.85□□□□□ -1.31
USH2AO75445 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC6.85□□□□□ -1.31
USH2AO75445 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 CHCHD2P2-201ENST00000503744 321 ntBASIC6.85□□□□□ -1.31
USH2AO75445 MRPL22P1-201ENST00000505398 616 ntBASIC6.85□□□□□ -1.31
USH2AO75445 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC6.85□□□□□ -1.31
USH2AO75445 AC005324.6-201ENST00000587972 613 ntBASIC6.85□□□□□ -1.31
USH2AO75445 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
USH2AO75445 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC6.85□□□□□ -1.31
USH2AO75445 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
USH2AO75445 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC6.85□□□□□ -1.31
USH2AO75445 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
USH2AO75445 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC6.85□□□□□ -1.31
USH2AO75445 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
USH2AO75445 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC6.85□□□□□ -1.31
USH2AO75445 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
USH2AO75445 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC6.85□□□□□ -1.31
USH2AO75445 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC6.85□□□□□ -1.31
USH2AO75445 AC108724.1-201ENST00000481669 352 ntBASIC6.85□□□□□ -1.31
USH2AO75445 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC6.85□□□□□ -1.31
USH2AO75445 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC6.85□□□□□ -1.31
USH2AO75445 ABHD17AP9-201ENST00000561925 548 ntBASIC6.85□□□□□ -1.31
USH2AO75445 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC6.85□□□□□ -1.31
USH2AO75445 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms