Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.78□□□□□ -0.2
XRCC2O43543 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
XRCC2O43543 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.78□□□□□ -0.2
XRCC2O43543 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.78□□□□□ -0.2
XRCC2O43543 SPDYE7P-202ENST00000420373 878 ntBASIC13.78□□□□□ -0.2
XRCC2O43543 RPP21-221ENST00000428040 594 ntTSL 2 BASIC13.78□□□□□ -0.2
XRCC2O43543 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
XRCC2O43543 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
XRCC2O43543 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.78□□□□□ -0.2
XRCC2O43543 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.78□□□□□ -0.2
XRCC2O43543 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.78□□□□□ -0.2
XRCC2O43543 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
XRCC2O43543 CALM1-205ENST00000553542 877 ntTSL 5 BASIC13.78□□□□□ -0.2
XRCC2O43543 AC093520.2-201ENST00000561830 333 ntBASIC13.78□□□□□ -0.2
XRCC2O43543 AC105021.1-202ENST00000570572 669 ntBASIC13.78□□□□□ -0.2
XRCC2O43543 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.78□□□□□ -0.2
XRCC2O43543 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
XRCC2O43543 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
XRCC2O43543 AC003101.2-201ENST00000612557 442 ntBASIC13.78□□□□□ -0.2
XRCC2O43543 AC007967.4-201ENST00000614700 386 ntBASIC13.78□□□□□ -0.2
XRCC2O43543 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.78□□□□□ -0.2
XRCC2O43543 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13.78□□□□□ -0.2
XRCC2O43543 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
XRCC2O43543 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.78□□□□□ -0.2
XRCC2O43543 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
XRCC2O43543 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
XRCC2O43543 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
XRCC2O43543 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
XRCC2O43543 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.78□□□□□ -0.2
XRCC2O43543 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.78□□□□□ -0.2
XRCC2O43543 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
XRCC2O43543 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
XRCC2O43543 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.78□□□□□ -0.2
XRCC2O43543 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
XRCC2O43543 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
XRCC2O43543 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
XRCC2O43543 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
XRCC2O43543 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
XRCC2O43543 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
XRCC2O43543 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
XRCC2O43543 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.77□□□□□ -0.2
XRCC2O43543 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
XRCC2O43543 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
XRCC2O43543 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.77□□□□□ -0.21
XRCC2O43543 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
XRCC2O43543 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
XRCC2O43543 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
XRCC2O43543 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
XRCC2O43543 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
XRCC2O43543 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
XRCC2O43543 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
XRCC2O43543 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.77□□□□□ -0.21
XRCC2O43543 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
XRCC2O43543 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
XRCC2O43543 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
XRCC2O43543 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
XRCC2O43543 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
XRCC2O43543 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
XRCC2O43543 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
XRCC2O43543 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
XRCC2O43543 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.77□□□□□ -0.21
XRCC2O43543 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.77□□□□□ -0.21
XRCC2O43543 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.77□□□□□ -0.21
XRCC2O43543 SPDYE14P-201ENST00000442619 822 ntBASIC13.77□□□□□ -0.21
XRCC2O43543 AP006288.1-201ENST00000446065 395 ntBASIC13.77□□□□□ -0.21
XRCC2O43543 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
XRCC2O43543 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.77□□□□□ -0.21
XRCC2O43543 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
XRCC2O43543 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
XRCC2O43543 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
XRCC2O43543 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.77□□□□□ -0.21
XRCC2O43543 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.77□□□□□ -0.21
XRCC2O43543 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.77□□□□□ -0.21
XRCC2O43543 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.77□□□□□ -0.21
XRCC2O43543 TMBIM7P-203ENST00000641617 1718 ntBASIC13.77□□□□□ -0.21
XRCC2O43543 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
XRCC2O43543 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.21
XRCC2O43543 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
XRCC2O43543 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
XRCC2O43543 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
XRCC2O43543 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
XRCC2O43543 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
XRCC2O43543 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.77□□□□□ -0.21
XRCC2O43543 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
XRCC2O43543 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
XRCC2O43543 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
XRCC2O43543 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
XRCC2O43543 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.77□□□□□ -0.21
XRCC2O43543 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.77□□□□□ -0.21
XRCC2O43543 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
XRCC2O43543 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
XRCC2O43543 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
XRCC2O43543 AC087481.3-201ENST00000602886 1894 ntBASIC13.76□□□□□ -0.21
XRCC2O43543 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
XRCC2O43543 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
XRCC2O43543 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.76□□□□□ -0.21
XRCC2O43543 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
XRCC2O43543 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
XRCC2O43543 CICP13-201ENST00000422015 2789 ntBASIC13.76□□□□□ -0.21
XRCC2O43543 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms