Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.88■□□□□ 0.13
SMAD6O43541 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMAD6O43541 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMAD6O43541 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMAD6O43541 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
SMAD6O43541 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMAD6O43541 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
SMAD6O43541 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.88■□□□□ 0.13
SMAD6O43541 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMAD6O43541 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMAD6O43541 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMAD6O43541 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
SMAD6O43541 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SMAD6O43541 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.88■□□□□ 0.13
SMAD6O43541 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.88■□□□□ 0.13
SMAD6O43541 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.88■□□□□ 0.13
SMAD6O43541 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.88■□□□□ 0.13
SMAD6O43541 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.88■□□□□ 0.13
SMAD6O43541 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
SMAD6O43541 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.88■□□□□ 0.13
SMAD6O43541 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.88■□□□□ 0.13
SMAD6O43541 AC015910.1-201ENST00000579400 975 ntBASIC15.88■□□□□ 0.13
SMAD6O43541 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SMAD6O43541 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SMAD6O43541 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.88■□□□□ 0.13
SMAD6O43541 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMAD6O43541 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMAD6O43541 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMAD6O43541 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC15.88■□□□□ 0.13
SMAD6O43541 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SMAD6O43541 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMAD6O43541 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SMAD6O43541 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SMAD6O43541 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.88■□□□□ 0.13
SMAD6O43541 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
SMAD6O43541 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC15.87■□□□□ 0.13
SMAD6O43541 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.87■□□□□ 0.13
SMAD6O43541 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.87■□□□□ 0.13
SMAD6O43541 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMAD6O43541 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.87■□□□□ 0.13
SMAD6O43541 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.87■□□□□ 0.13
SMAD6O43541 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMAD6O43541 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMAD6O43541 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SMAD6O43541 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMAD6O43541 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.87■□□□□ 0.13
SMAD6O43541 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SMAD6O43541 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.87■□□□□ 0.13
SMAD6O43541 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMAD6O43541 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMAD6O43541 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMAD6O43541 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMAD6O43541 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMAD6O43541 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.87■□□□□ 0.13
SMAD6O43541 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SMAD6O43541 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC15.87■□□□□ 0.13
SMAD6O43541 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.87■□□□□ 0.13
SMAD6O43541 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC15.87■□□□□ 0.13
SMAD6O43541 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.87■□□□□ 0.13
SMAD6O43541 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.87■□□□□ 0.13
SMAD6O43541 RN7SL837P-201ENST00000463010 287 ntBASIC15.87■□□□□ 0.13
SMAD6O43541 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.87■□□□□ 0.13
SMAD6O43541 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.87■□□□□ 0.13
SMAD6O43541 PAM16-204ENST00000571941 674 ntTSL 3 BASIC15.87■□□□□ 0.13
SMAD6O43541 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.87■□□□□ 0.13
SMAD6O43541 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.87■□□□□ 0.13
SMAD6O43541 PAUPAR-201ENST00000630360 2965 ntBASIC15.87■□□□□ 0.13
SMAD6O43541 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.87■□□□□ 0.13
SMAD6O43541 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SMAD6O43541 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.87■□□□□ 0.13
SMAD6O43541 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.87■□□□□ 0.13
SMAD6O43541 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SMAD6O43541 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SMAD6O43541 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.87■□□□□ 0.13
SMAD6O43541 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMAD6O43541 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.87■□□□□ 0.13
SMAD6O43541 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SMAD6O43541 AC127383.1-201ENST00000444697 1800 ntBASIC15.87■□□□□ 0.13
SMAD6O43541 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SMAD6O43541 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SMAD6O43541 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SMAD6O43541 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMAD6O43541 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMAD6O43541 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SMAD6O43541 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.86■□□□□ 0.13
SMAD6O43541 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.86■□□□□ 0.13
SMAD6O43541 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
SMAD6O43541 WARS-232ENST00000556645 2508 ntTSL 5 BASIC15.86■□□□□ 0.13
SMAD6O43541 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.86■□□□□ 0.13
SMAD6O43541 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMAD6O43541 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SMAD6O43541 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
SMAD6O43541 AL133267.1-201ENST00000398220 340 ntBASIC15.86■□□□□ 0.13
SMAD6O43541 AL512384.1-201ENST00000406683 331 ntBASIC15.86■□□□□ 0.13
SMAD6O43541 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.86■□□□□ 0.13
SMAD6O43541 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC15.86■□□□□ 0.13
SMAD6O43541 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.86■□□□□ 0.13
SMAD6O43541 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.86■□□□□ 0.13
SMAD6O43541 VDAC1P7-201ENST00000462417 847 ntBASIC15.86■□□□□ 0.13
SMAD6O43541 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms