Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PAX4O43316 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PAX4O43316 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
PAX4O43316 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PAX4O43316 AC023141.5-201ENST00000458585 616 ntBASIC11.38□□□□□ -0.59
PAX4O43316 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
PAX4O43316 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
PAX4O43316 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
PAX4O43316 MAX-210ENST00000555419 765 ntTSL 5 BASIC11.38□□□□□ -0.59
PAX4O43316 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PAX4O43316 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC11.38□□□□□ -0.59
PAX4O43316 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC11.38□□□□□ -0.59
PAX4O43316 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC11.38□□□□□ -0.59
PAX4O43316 SSH2-211ENST00000590153 570 ntTSL 4 BASIC11.38□□□□□ -0.59
PAX4O43316 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC11.38□□□□□ -0.59
PAX4O43316 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC11.38□□□□□ -0.59
PAX4O43316 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
PAX4O43316 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC11.38□□□□□ -0.59
PAX4O43316 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC11.38□□□□□ -0.59
PAX4O43316 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC11.38□□□□□ -0.59
PAX4O43316 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PAX4O43316 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PAX4O43316 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PAX4O43316 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
PAX4O43316 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PAX4O43316 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC11.38□□□□□ -0.59
PAX4O43316 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
PAX4O43316 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
PAX4O43316 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
PAX4O43316 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC11.38□□□□□ -0.59
PAX4O43316 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PAX4O43316 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PAX4O43316 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PAX4O43316 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
PAX4O43316 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
PAX4O43316 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
PAX4O43316 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
PAX4O43316 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
PAX4O43316 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC11.38□□□□□ -0.59
PAX4O43316 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC11.38□□□□□ -0.59
PAX4O43316 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC11.38□□□□□ -0.59
PAX4O43316 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PAX4O43316 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
PAX4O43316 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC11.37□□□□□ -0.59
PAX4O43316 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
PAX4O43316 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
PAX4O43316 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC11.37□□□□□ -0.59
PAX4O43316 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC11.37□□□□□ -0.59
PAX4O43316 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
PAX4O43316 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC11.37□□□□□ -0.59
PAX4O43316 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PAX4O43316 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC11.37□□□□□ -0.59
PAX4O43316 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
PAX4O43316 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PAX4O43316 BANP-201ENST00000286122 2368 ntTSL 5 BASIC11.37□□□□□ -0.59
PAX4O43316 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PAX4O43316 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
PAX4O43316 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PAX4O43316 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PAX4O43316 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PAX4O43316 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC11.37□□□□□ -0.59
PAX4O43316 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PAX4O43316 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
PAX4O43316 AL353705.2-201ENST00000428243 662 ntBASIC11.37□□□□□ -0.59
PAX4O43316 DNAJB3-202ENST00000449667 1266 ntBASIC11.37□□□□□ -0.59
PAX4O43316 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC11.37□□□□□ -0.59
PAX4O43316 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC11.37□□□□□ -0.59
PAX4O43316 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
PAX4O43316 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC11.37□□□□□ -0.59
PAX4O43316 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PAX4O43316 ALG1L8P-201ENST00000533887 760 ntBASIC11.37□□□□□ -0.59
PAX4O43316 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PAX4O43316 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC11.37□□□□□ -0.59
PAX4O43316 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PAX4O43316 RARRES2P9-201ENST00000565168 469 ntBASIC11.37□□□□□ -0.59
PAX4O43316 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC11.37□□□□□ -0.59
PAX4O43316 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC11.37□□□□□ -0.59
PAX4O43316 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PAX4O43316 AC084121.4-201ENST00000641598 221 ntBASIC11.37□□□□□ -0.59
PAX4O43316 AF228730.8-201ENST00000642140 221 ntBASIC11.37□□□□□ -0.59
PAX4O43316 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC11.37□□□□□ -0.59
PAX4O43316 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC11.37□□□□□ -0.59
PAX4O43316 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
PAX4O43316 C8orf49-201ENST00000525043 1968 ntBASIC11.37□□□□□ -0.59
PAX4O43316 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
PAX4O43316 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
PAX4O43316 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC11.37□□□□□ -0.59
PAX4O43316 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PAX4O43316 MIR193BHG-211ENST00000641433 5365 ntBASIC11.37□□□□□ -0.59
PAX4O43316 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PAX4O43316 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
PAX4O43316 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC11.37□□□□□ -0.59
PAX4O43316 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
PAX4O43316 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
PAX4O43316 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PAX4O43316 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PAX4O43316 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
PAX4O43316 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC11.36□□□□□ -0.59
PAX4O43316 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC11.36□□□□□ -0.59
PAX4O43316 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms