Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC18■□□□□ 0.47
ATP2A1O14983 BCRP2-202ENST00000447763 634 ntBASIC18■□□□□ 0.47
ATP2A1O14983 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18■□□□□ 0.47
ATP2A1O14983 CTBP2P5-201ENST00000454986 1264 ntBASIC18■□□□□ 0.47
ATP2A1O14983 AC093433.1-201ENST00000458048 571 ntBASIC18■□□□□ 0.47
ATP2A1O14983 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC18■□□□□ 0.47
ATP2A1O14983 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18■□□□□ 0.47
ATP2A1O14983 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
ATP2A1O14983 BCRP6-201ENST00000510112 632 ntBASIC18■□□□□ 0.47
ATP2A1O14983 BCRP7-201ENST00000511549 544 ntBASIC18■□□□□ 0.47
ATP2A1O14983 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC18■□□□□ 0.47
ATP2A1O14983 RPL28-207ENST00000558815 616 ntTSL 2 BASIC18■□□□□ 0.47
ATP2A1O14983 AC015910.1-201ENST00000579400 975 ntBASIC18■□□□□ 0.47
ATP2A1O14983 MIR4313-201ENST00000580760 101 ntBASIC18■□□□□ 0.47
ATP2A1O14983 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18■□□□□ 0.47
ATP2A1O14983 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18■□□□□ 0.47
ATP2A1O14983 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC18■□□□□ 0.47
ATP2A1O14983 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18■□□□□ 0.47
ATP2A1O14983 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC18■□□□□ 0.47
ATP2A1O14983 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
ATP2A1O14983 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC18■□□□□ 0.47
ATP2A1O14983 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC18■□□□□ 0.47
ATP2A1O14983 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATP2A1O14983 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
ATP2A1O14983 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC18■□□□□ 0.47
ATP2A1O14983 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ATP2A1O14983 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATP2A1O14983 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.99■□□□□ 0.47
ATP2A1O14983 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATP2A1O14983 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
ATP2A1O14983 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ATP2A1O14983 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
ATP2A1O14983 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ATP2A1O14983 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
ATP2A1O14983 AL596087.1-201ENST00000400979 1969 ntBASIC17.99■□□□□ 0.47
ATP2A1O14983 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATP2A1O14983 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ATP2A1O14983 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
ATP2A1O14983 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
ATP2A1O14983 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATP2A1O14983 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATP2A1O14983 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATP2A1O14983 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ATP2A1O14983 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.99■□□□□ 0.47
ATP2A1O14983 MGST3-203ENST00000367885 680 ntTSL 2 BASIC17.99■□□□□ 0.47
ATP2A1O14983 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ATP2A1O14983 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.99■□□□□ 0.47
ATP2A1O14983 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.99■□□□□ 0.47
ATP2A1O14983 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
ATP2A1O14983 RPL7P3-201ENST00000441388 714 ntBASIC17.99■□□□□ 0.47
ATP2A1O14983 AL355864.2-201ENST00000447420 863 ntBASIC17.99■□□□□ 0.47
ATP2A1O14983 BNIP3P42-201ENST00000454982 569 ntBASIC17.99■□□□□ 0.47
ATP2A1O14983 FO681548.1-201ENST00000455617 1132 ntBASIC17.99■□□□□ 0.47
ATP2A1O14983 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ATP2A1O14983 AC022137.2-201ENST00000503482 481 ntBASIC17.99■□□□□ 0.47
ATP2A1O14983 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.99■□□□□ 0.47
ATP2A1O14983 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.99■□□□□ 0.47
ATP2A1O14983 MFF-223ENST00000524634 647 ntTSL 2 BASIC17.99■□□□□ 0.47
ATP2A1O14983 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC17.99■□□□□ 0.47
ATP2A1O14983 BNIP3P29-201ENST00000598302 571 ntBASIC17.99■□□□□ 0.47
ATP2A1O14983 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.99■□□□□ 0.47
ATP2A1O14983 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.99■□□□□ 0.47
ATP2A1O14983 AC011447.5-201ENST00000616168 564 ntBASIC17.99■□□□□ 0.47
ATP2A1O14983 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATP2A1O14983 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ATP2A1O14983 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.99■□□□□ 0.47
ATP2A1O14983 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATP2A1O14983 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATP2A1O14983 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATP2A1O14983 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP2A1O14983 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ATP2A1O14983 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP2A1O14983 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP2A1O14983 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ATP2A1O14983 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP2A1O14983 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP2A1O14983 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.98■□□□□ 0.47
ATP2A1O14983 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ATP2A1O14983 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ATP2A1O14983 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.98■□□□□ 0.47
ATP2A1O14983 USB1-202ENST00000423271 1217 ntTSL 2 BASIC17.98■□□□□ 0.47
ATP2A1O14983 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
ATP2A1O14983 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.98■□□□□ 0.47
ATP2A1O14983 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.98■□□□□ 0.47
ATP2A1O14983 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.98■□□□□ 0.47
ATP2A1O14983 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.98■□□□□ 0.47
ATP2A1O14983 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.98■□□□□ 0.47
ATP2A1O14983 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.98■□□□□ 0.47
ATP2A1O14983 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ATP2A1O14983 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP2A1O14983 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ATP2A1O14983 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
ATP2A1O14983 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
ATP2A1O14983 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP2A1O14983 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ATP2A1O14983 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
ATP2A1O14983 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP2A1O14983 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
ATP2A1O14983 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATP2A1O14983 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms