Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN5O00501 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN5O00501 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN5O00501 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN5O00501 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN5O00501 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN5O00501 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN5O00501 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN5O00501 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN5O00501 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC16.6■□□□□ 0.25
CLDN5O00501 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CLDN5O00501 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN5O00501 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.6■□□□□ 0.25
CLDN5O00501 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN5O00501 FAM86LP-201ENST00000478302 853 ntBASIC16.6■□□□□ 0.25
CLDN5O00501 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN5O00501 RRP7BP-205ENST00000566851 833 ntBASIC16.6■□□□□ 0.25
CLDN5O00501 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.6■□□□□ 0.25
CLDN5O00501 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC16.6■□□□□ 0.25
CLDN5O00501 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN5O00501 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.6■□□□□ 0.25
CLDN5O00501 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN5O00501 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN5O00501 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CLDN5O00501 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
CLDN5O00501 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN5O00501 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN5O00501 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN5O00501 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN5O00501 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN5O00501 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN5O00501 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN5O00501 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN5O00501 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.6■□□□□ 0.25
CLDN5O00501 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CLDN5O00501 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CLDN5O00501 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.6■□□□□ 0.25
CLDN5O00501 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.6■□□□□ 0.25
CLDN5O00501 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CLDN5O00501 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN5O00501 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN5O00501 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN5O00501 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN5O00501 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN5O00501 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN5O00501 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN5O00501 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN5O00501 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN5O00501 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN5O00501 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN5O00501 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN5O00501 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CLDN5O00501 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN5O00501 AC005034.1-201ENST00000426657 489 ntBASIC16.59■□□□□ 0.25
CLDN5O00501 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.59■□□□□ 0.25
CLDN5O00501 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN5O00501 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CLDN5O00501 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC16.59■□□□□ 0.25
CLDN5O00501 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.59■□□□□ 0.25
CLDN5O00501 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
CLDN5O00501 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN5O00501 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CLDN5O00501 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN5O00501 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN5O00501 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN5O00501 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN5O00501 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN5O00501 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN5O00501 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN5O00501 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN5O00501 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN5O00501 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN5O00501 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.59■□□□□ 0.25
CLDN5O00501 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN5O00501 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CLDN5O00501 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN5O00501 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.59■□□□□ 0.25
CLDN5O00501 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.59■□□□□ 0.25
CLDN5O00501 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CLDN5O00501 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN5O00501 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN5O00501 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN5O00501 AC007950.2-201ENST00000615045 2347 ntBASIC16.58■□□□□ 0.25
CLDN5O00501 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN5O00501 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.58■□□□□ 0.25
CLDN5O00501 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.58■□□□□ 0.25
CLDN5O00501 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN5O00501 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN5O00501 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CLDN5O00501 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CLDN5O00501 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN5O00501 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN5O00501 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CLDN5O00501 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN5O00501 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN5O00501 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.58■□□□□ 0.24
CLDN5O00501 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN5O00501 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CLDN5O00501 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CLDN5O00501 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms