Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDX39AO00148 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DDX39AO00148 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC17.74■□□□□ 0.43
DDX39AO00148 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDX39AO00148 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDX39AO00148 AC026691.1-201ENST00000602502 2017 ntBASIC17.74■□□□□ 0.43
DDX39AO00148 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DDX39AO00148 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDX39AO00148 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDX39AO00148 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDX39AO00148 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDX39AO00148 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
DDX39AO00148 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDX39AO00148 AP006294.1-201ENST00000415407 339 ntBASIC17.74■□□□□ 0.43
DDX39AO00148 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DDX39AO00148 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.74■□□□□ 0.43
DDX39AO00148 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
DDX39AO00148 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
DDX39AO00148 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
DDX39AO00148 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.74■□□□□ 0.43
DDX39AO00148 RERG-209ENST00000546331 1383 ntTSL 2 BASIC17.74■□□□□ 0.43
DDX39AO00148 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDX39AO00148 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
DDX39AO00148 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDX39AO00148 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
DDX39AO00148 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17.74■□□□□ 0.43
DDX39AO00148 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
DDX39AO00148 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC17.74■□□□□ 0.43
DDX39AO00148 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
DDX39AO00148 DEK-201ENST00000244776 1441 ntTSL 2 BASIC17.73■□□□□ 0.43
DDX39AO00148 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DDX39AO00148 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC17.73■□□□□ 0.43
DDX39AO00148 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.73■□□□□ 0.43
DDX39AO00148 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
DDX39AO00148 AC008894.3-201ENST00000624324 3103 ntBASIC17.73■□□□□ 0.43
DDX39AO00148 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX39AO00148 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX39AO00148 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX39AO00148 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DDX39AO00148 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.73■□□□□ 0.43
DDX39AO00148 NME2P1-201ENST00000426182 414 ntBASIC17.73■□□□□ 0.43
DDX39AO00148 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
DDX39AO00148 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
DDX39AO00148 RN7SL399P-201ENST00000471648 279 ntBASIC17.73■□□□□ 0.43
DDX39AO00148 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.73■□□□□ 0.43
DDX39AO00148 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
DDX39AO00148 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DDX39AO00148 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.73■□□□□ 0.43
DDX39AO00148 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DDX39AO00148 AC036164.1-201ENST00000570544 333 ntBASIC17.73■□□□□ 0.43
DDX39AO00148 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC17.73■□□□□ 0.43
DDX39AO00148 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.73■□□□□ 0.43
DDX39AO00148 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.73■□□□□ 0.43
DDX39AO00148 AC099568.2-201ENST00000609194 695 ntBASIC17.73■□□□□ 0.43
DDX39AO00148 AL391069.4-201ENST00000609583 481 ntBASIC17.73■□□□□ 0.43
DDX39AO00148 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
DDX39AO00148 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
DDX39AO00148 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX39AO00148 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
DDX39AO00148 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
DDX39AO00148 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.73■□□□□ 0.43
DDX39AO00148 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.73■□□□□ 0.43
DDX39AO00148 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX39AO00148 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
DDX39AO00148 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
DDX39AO00148 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.73■□□□□ 0.43
DDX39AO00148 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
DDX39AO00148 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX39AO00148 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
DDX39AO00148 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.72■□□□□ 0.43
DDX39AO00148 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DDX39AO00148 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.72■□□□□ 0.43
DDX39AO00148 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX39AO00148 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.72■□□□□ 0.43
DDX39AO00148 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX39AO00148 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
DDX39AO00148 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX39AO00148 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.72■□□□□ 0.43
DDX39AO00148 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX39AO00148 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.72■□□□□ 0.43
DDX39AO00148 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.72■□□□□ 0.43
DDX39AO00148 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX39AO00148 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DDX39AO00148 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
DDX39AO00148 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.72■□□□□ 0.43
DDX39AO00148 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.72■□□□□ 0.43
DDX39AO00148 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC17.72■□□□□ 0.43
DDX39AO00148 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.72■□□□□ 0.43
DDX39AO00148 GAPDHP21-201ENST00000450301 1010 ntBASIC17.72■□□□□ 0.43
DDX39AO00148 INE1-201ENST00000456273 945 ntBASIC17.72■□□□□ 0.43
DDX39AO00148 RN7SL752P-201ENST00000463779 287 ntBASIC17.72■□□□□ 0.43
DDX39AO00148 AC104596.2-201ENST00000512793 793 ntBASIC17.72■□□□□ 0.43
DDX39AO00148 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.72■□□□□ 0.43
DDX39AO00148 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
DDX39AO00148 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.72■□□□□ 0.43
DDX39AO00148 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.72■□□□□ 0.43
DDX39AO00148 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
DDX39AO00148 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX39AO00148 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
DDX39AO00148 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms