Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 GGTLC5P-201ENST00000617623 998 ntBASIC11.62□□□□□ -0.55
SMKR1H3BMG3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC11.62□□□□□ -0.55
SMKR1H3BMG3 AC097493.4-201ENST00000641197 219 ntBASIC11.62□□□□□ -0.55
SMKR1H3BMG3 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMKR1H3BMG3 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMKR1H3BMG3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMKR1H3BMG3 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SMKR1H3BMG3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMKR1H3BMG3 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
SMKR1H3BMG3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMKR1H3BMG3 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SMKR1H3BMG3 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMKR1H3BMG3 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMKR1H3BMG3 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC11.62□□□□□ -0.55
SMKR1H3BMG3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMKR1H3BMG3 MED25-212ENST00000618715 1467 ntTSL 5 BASIC11.62□□□□□ -0.55
SMKR1H3BMG3 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMKR1H3BMG3 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
SMKR1H3BMG3 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMKR1H3BMG3 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SMKR1H3BMG3 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
SMKR1H3BMG3 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC11.62□□□□□ -0.55
SMKR1H3BMG3 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
SMKR1H3BMG3 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
SMKR1H3BMG3 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC11.62□□□□□ -0.55
SMKR1H3BMG3 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC11.62□□□□□ -0.55
SMKR1H3BMG3 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC11.62□□□□□ -0.55
SMKR1H3BMG3 AC140479.7-201ENST00000636301 2332 ntBASIC11.61□□□□□ -0.55
SMKR1H3BMG3 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 AC126365.1-201ENST00000578585 1514 ntBASIC11.61□□□□□ -0.55
SMKR1H3BMG3 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 AC132008.2-207ENST00000454517 770 ntBASIC11.61□□□□□ -0.55
SMKR1H3BMG3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
SMKR1H3BMG3 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC11.6□□□□□ -0.55
SMKR1H3BMG3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SMKR1H3BMG3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC11.6□□□□□ -0.55
SMKR1H3BMG3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC11.6□□□□□ -0.55
SMKR1H3BMG3 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC11.6□□□□□ -0.55
SMKR1H3BMG3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC11.6□□□□□ -0.55
SMKR1H3BMG3 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SMKR1H3BMG3 LRRFIP1P1-201ENST00000498774 2246 ntBASIC11.6□□□□□ -0.55
SMKR1H3BMG3 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMKR1H3BMG3 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMKR1H3BMG3 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
SMKR1H3BMG3 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
SMKR1H3BMG3 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
SMKR1H3BMG3 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
SMKR1H3BMG3 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC11.6□□□□□ -0.55
SMKR1H3BMG3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC11.6□□□□□ -0.55
SMKR1H3BMG3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC11.6□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms