Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 AC063926.3-201ENST00000624734 5658 ntBASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 RARRES2P8-201ENST00000566335 367 ntBASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 AL138918.1-201ENST00000568306 659 ntBASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 NFIC-211ENST00000641145 8399 ntBASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
TRBV6-7A0A0A0MS04 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 FOXO1B-201ENST00000504678 1527 ntBASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 REXO1L1P-202ENST00000608646 1974 ntBASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 BEND3P1-201ENST00000421591 1944 ntBASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 BEX3-201ENST00000361298 921 ntTSL 2 BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC004987.2-201ENST00000395959 1148 ntBASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC099522.2-201ENST00000607001 744 ntBASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 AC018892.3-201ENST00000623986 2499 ntBASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.24□□□□□ -0.29
TRBV6-7A0A0A0MS04 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms