Protein–RNA interactions for Protein: Q9Y577

TRIM17, E3 ubiquitin-protein ligase TRIM17, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM17Q9Y577 CFL1-206ENST00000527344 962 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM17Q9Y577 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
TRIM17Q9Y577 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TRIM17Q9Y577 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM17Q9Y577 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRIM17Q9Y577 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM17Q9Y577 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM17Q9Y577 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM17Q9Y577 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM17Q9Y577 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM17Q9Y577 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM17Q9Y577 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.67■□□□□ 0.42
TRIM17Q9Y577 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
TRIM17Q9Y577 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 RNU1-114P-201ENST00000365297 166 ntBASIC17.66■□□□□ 0.42
TRIM17Q9Y577 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 FAM8A4P-201ENST00000435433 1213 ntBASIC17.66■□□□□ 0.42
TRIM17Q9Y577 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 AC135983.4-201ENST00000564116 1262 ntBASIC17.66■□□□□ 0.42
TRIM17Q9Y577 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TRIM17Q9Y577 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 HLA-A-202ENST00000376806 1854 ntBASIC17.65■□□□□ 0.42
TRIM17Q9Y577 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 NOC2LP1-201ENST00000450578 752 ntBASIC17.65■□□□□ 0.42
TRIM17Q9Y577 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 RN7SL8P-201ENST00000461771 266 ntBASIC17.65■□□□□ 0.42
TRIM17Q9Y577 AC021723.1-201ENST00000486306 515 ntBASIC17.65■□□□□ 0.42
TRIM17Q9Y577 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 NPM1P43-201ENST00000558669 786 ntBASIC17.65■□□□□ 0.42
TRIM17Q9Y577 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 AC097359.3-201ENST00000603982 1210 ntBASIC17.65■□□□□ 0.42
TRIM17Q9Y577 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRIM17Q9Y577 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms