Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 SBF1P1-201ENST00000444527 5631 ntBASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RHBDD3Q9Y3P4 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 AC105250.1-201ENST00000509378 2057 ntBASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 HTR5BP-201ENST00000430851 1154 ntBASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 AC138035.3-201ENST00000622706 2791 ntBASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RHBDD3Q9Y3P4 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 AC090616.6-203ENST00000579186 1945 ntBASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 GPX1P2-201ENST00000429271 606 ntBASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 SPCS2P4-201ENST00000436160 681 ntBASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 ACTG1P14-201ENST00000446382 1122 ntBASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 TIMM8BP1-201ENST00000452384 211 ntBASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 ALG1L5P-201ENST00000482043 771 ntBASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 AC079140.1-201ENST00000508039 487 ntBASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RHBDD3Q9Y3P4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms