Protein–RNA interactions for Protein: Q9Y2Q0

ATP8A1, Phospholipid-transporting ATPase IA, humanhuman

Predictions only

Length 1,164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP8A1Q9Y2Q0 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 KRT8P48-201ENST00000515599 1220 ntBASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ATP8A1Q9Y2Q0 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
ATP8A1Q9Y2Q0 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC16.71■□□□□ 0.26
ATP8A1Q9Y2Q0 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 AC004461.1-201ENST00000412461 403 ntBASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 AC092183.1-201ENST00000469884 875 ntBASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 AC004835.2-201ENST00000603762 682 ntBASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 SNX18-202ENST00000343017 3140 ntBASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP8A1Q9Y2Q0 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP8A1Q9Y2Q0 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC16.69■□□□□ 0.26
ATP8A1Q9Y2Q0 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP8A1Q9Y2Q0 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP8A1Q9Y2Q0 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP8A1Q9Y2Q0 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.69■□□□□ 0.26
ATP8A1Q9Y2Q0 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
ATP8A1Q9Y2Q0 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP8A1Q9Y2Q0 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP8A1Q9Y2Q0 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.69■□□□□ 0.26
ATP8A1Q9Y2Q0 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP8A1Q9Y2Q0 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms