Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 API5-202ENST00000420461 2009 ntTSL 2 BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 ACKR1-201ENST00000368121 1240 ntBASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 AC004066.1-201ENST00000502488 802 ntBASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 CU634019.7-201ENST00000624153 1185 ntBASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 FP236241.2-201ENST00000624906 1185 ntBASIC20.97■□□□□ 0.95
NPC1L1Q9UHC9 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 ZBTB45P1-201ENST00000452761 1456 ntBASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 AC005034.1-201ENST00000426657 489 ntBASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 ACTG1P3-201ENST00000431775 1114 ntBASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 INE1-201ENST00000456273 945 ntBASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 USP32P1-208ENST00000506594 1164 ntBASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 NEU3-203ENST00000529024 581 ntTSL 3 BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 PUDP-206ENST00000540122 825 ntTSL 2 BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 REXO1L4P-201ENST00000605109 1937 ntBASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
NPC1L1Q9UHC9 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
NPC1L1Q9UHC9 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC20.95■□□□□ 0.94
NPC1L1Q9UHC9 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC20.95■□□□□ 0.94
NPC1L1Q9UHC9 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NPC1L1Q9UHC9 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NPC1L1Q9UHC9 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NPC1L1Q9UHC9 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
NPC1L1Q9UHC9 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NPC1L1Q9UHC9 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
NPC1L1Q9UHC9 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NPC1L1Q9UHC9 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NPC1L1Q9UHC9 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
NPC1L1Q9UHC9 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NPC1L1Q9UHC9 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
NPC1L1Q9UHC9 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NPC1L1Q9UHC9 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NPC1L1Q9UHC9 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NPC1L1Q9UHC9 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
NPC1L1Q9UHC9 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NPC1L1Q9UHC9 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
NPC1L1Q9UHC9 AL512384.1-201ENST00000406683 331 ntBASIC20.95■□□□□ 0.94
NPC1L1Q9UHC9 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC20.95■□□□□ 0.94
NPC1L1Q9UHC9 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC20.95■□□□□ 0.94
NPC1L1Q9UHC9 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
NPC1L1Q9UHC9 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC20.95■□□□□ 0.94
NPC1L1Q9UHC9 AP001063.1-201ENST00000568332 529 ntBASIC20.95■□□□□ 0.94
NPC1L1Q9UHC9 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC20.95■□□□□ 0.94
NPC1L1Q9UHC9 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
NPC1L1Q9UHC9 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms