Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
DUX4Q9UBX2 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
DUX4Q9UBX2 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DUX4Q9UBX2 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14□□□□□ -0.17
DUX4Q9UBX2 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC14□□□□□ -0.17
DUX4Q9UBX2 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DUX4Q9UBX2 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DUX4Q9UBX2 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
DUX4Q9UBX2 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
DUX4Q9UBX2 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
DUX4Q9UBX2 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
DUX4Q9UBX2 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
DUX4Q9UBX2 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
DUX4Q9UBX2 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
DUX4Q9UBX2 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
DUX4Q9UBX2 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
DUX4Q9UBX2 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14□□□□□ -0.17
DUX4Q9UBX2 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DUX4Q9UBX2 PMS2P7-201ENST00000506558 1336 ntBASIC14□□□□□ -0.17
DUX4Q9UBX2 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DUX4Q9UBX2 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DUX4Q9UBX2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
DUX4Q9UBX2 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
DUX4Q9UBX2 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14□□□□□ -0.17
DUX4Q9UBX2 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DUX4Q9UBX2 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
DUX4Q9UBX2 HMGA1P7-201ENST00000406908 502 ntBASIC14□□□□□ -0.17
DUX4Q9UBX2 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
DUX4Q9UBX2 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14□□□□□ -0.17
DUX4Q9UBX2 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14□□□□□ -0.17
DUX4Q9UBX2 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14□□□□□ -0.17
DUX4Q9UBX2 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
DUX4Q9UBX2 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14□□□□□ -0.17
DUX4Q9UBX2 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14□□□□□ -0.17
DUX4Q9UBX2 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14□□□□□ -0.17
DUX4Q9UBX2 AC091167.2-201ENST00000579581 588 ntBASIC14□□□□□ -0.17
DUX4Q9UBX2 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14□□□□□ -0.17
DUX4Q9UBX2 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
DUX4Q9UBX2 CYP2A7P1-201ENST00000595391 815 ntBASIC14□□□□□ -0.17
DUX4Q9UBX2 AC023141.13-201ENST00000604991 943 ntBASIC14□□□□□ -0.17
DUX4Q9UBX2 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14□□□□□ -0.17
DUX4Q9UBX2 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14□□□□□ -0.17
DUX4Q9UBX2 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
DUX4Q9UBX2 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14□□□□□ -0.17
DUX4Q9UBX2 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
DUX4Q9UBX2 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14□□□□□ -0.17
DUX4Q9UBX2 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
DUX4Q9UBX2 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DUX4Q9UBX2 LINC00895-201ENST00000629028 1637 ntBASIC14□□□□□ -0.17
DUX4Q9UBX2 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DUX4Q9UBX2 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14□□□□□ -0.17
DUX4Q9UBX2 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DUX4Q9UBX2 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
DUX4Q9UBX2 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
DUX4Q9UBX2 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
DUX4Q9UBX2 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
DUX4Q9UBX2 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC14□□□□□ -0.17
DUX4Q9UBX2 AC012569.1-201ENST00000591191 1524 ntBASIC14□□□□□ -0.17
DUX4Q9UBX2 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
DUX4Q9UBX2 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 HLA-A-202ENST00000376806 1854 ntBASIC13.99□□□□□ -0.17
DUX4Q9UBX2 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 AMT-206ENST00000458307 1860 ntTSL 2 BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.99□□□□□ -0.17
DUX4Q9UBX2 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
DUX4Q9UBX2 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms