Protein–RNA interactions for Protein: Q9NRA0

SPHK2, Sphingosine kinase 2, humanhuman

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK2Q9NRA0 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
SPHK2Q9NRA0 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.16
SPHK2Q9NRA0 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPHK2Q9NRA0 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPHK2Q9NRA0 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPHK2Q9NRA0 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPHK2Q9NRA0 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPHK2Q9NRA0 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.02■□□□□ 0.16
SPHK2Q9NRA0 KLF2P4-201ENST00000451959 1225 ntBASIC16.02■□□□□ 0.16
SPHK2Q9NRA0 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC16.02■□□□□ 0.16
SPHK2Q9NRA0 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.02■□□□□ 0.16
SPHK2Q9NRA0 IFT20-206ENST00000578122 834 ntTSL 2 BASIC16.02■□□□□ 0.16
SPHK2Q9NRA0 IFT20-208ENST00000578985 831 ntTSL 3 BASIC16.02■□□□□ 0.16
SPHK2Q9NRA0 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPHK2Q9NRA0 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.02■□□□□ 0.16
SPHK2Q9NRA0 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.02■□□□□ 0.16
SPHK2Q9NRA0 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
SPHK2Q9NRA0 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SPHK2Q9NRA0 AC112504.1-201ENST00000623415 1841 ntBASIC16.02■□□□□ 0.16
SPHK2Q9NRA0 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
SPHK2Q9NRA0 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
SPHK2Q9NRA0 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SPHK2Q9NRA0 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
SPHK2Q9NRA0 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.02■□□□□ 0.15
SPHK2Q9NRA0 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SPHK2Q9NRA0 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SPHK2Q9NRA0 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
SPHK2Q9NRA0 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
SPHK2Q9NRA0 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 CYP2T1P-202ENST00000641596 2535 ntBASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 ACKR1-201ENST00000368121 1240 ntBASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 AC092933.1-201ENST00000393644 945 ntBASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 GAPDHP40-201ENST00000505218 1006 ntBASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.01■□□□□ 0.15
SPHK2Q9NRA0 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SPHK2Q9NRA0 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
SPHK2Q9NRA0 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SPHK2Q9NRA0 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SPHK2Q9NRA0 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16■□□□□ 0.15
SPHK2Q9NRA0 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
SPHK2Q9NRA0 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
SPHK2Q9NRA0 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SPHK2Q9NRA0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SPHK2Q9NRA0 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SPHK2Q9NRA0 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16■□□□□ 0.15
SPHK2Q9NRA0 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16■□□□□ 0.15
SPHK2Q9NRA0 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16■□□□□ 0.15
SPHK2Q9NRA0 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16■□□□□ 0.15
SPHK2Q9NRA0 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16■□□□□ 0.15
SPHK2Q9NRA0 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16■□□□□ 0.15
SPHK2Q9NRA0 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16■□□□□ 0.15
SPHK2Q9NRA0 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC16■□□□□ 0.15
SPHK2Q9NRA0 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16■□□□□ 0.15
SPHK2Q9NRA0 AC022137.2-201ENST00000503482 481 ntBASIC16■□□□□ 0.15
SPHK2Q9NRA0 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16■□□□□ 0.15
SPHK2Q9NRA0 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16■□□□□ 0.15
SPHK2Q9NRA0 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16■□□□□ 0.15
SPHK2Q9NRA0 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC16■□□□□ 0.15
SPHK2Q9NRA0 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC16■□□□□ 0.15
SPHK2Q9NRA0 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16■□□□□ 0.15
SPHK2Q9NRA0 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
SPHK2Q9NRA0 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SPHK2Q9NRA0 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16■□□□□ 0.15
SPHK2Q9NRA0 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms