Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TLR9Q9NR96 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.67■□□□□ 0.26
TLR9Q9NR96 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TLR9Q9NR96 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.67■□□□□ 0.26
TLR9Q9NR96 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.67■□□□□ 0.26
TLR9Q9NR96 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.67■□□□□ 0.26
TLR9Q9NR96 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC16.67■□□□□ 0.26
TLR9Q9NR96 AP001582.1-201ENST00000525856 295 ntBASIC16.67■□□□□ 0.26
TLR9Q9NR96 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
TLR9Q9NR96 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.67■□□□□ 0.26
TLR9Q9NR96 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.67■□□□□ 0.26
TLR9Q9NR96 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.67■□□□□ 0.26
TLR9Q9NR96 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TLR9Q9NR96 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.67■□□□□ 0.26
TLR9Q9NR96 AC097359.3-201ENST00000603982 1210 ntBASIC16.67■□□□□ 0.26
TLR9Q9NR96 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TLR9Q9NR96 AC107373.2-201ENST00000607735 490 ntBASIC16.67■□□□□ 0.26
TLR9Q9NR96 AL022328.3-201ENST00000607943 679 ntBASIC16.67■□□□□ 0.26
TLR9Q9NR96 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.67■□□□□ 0.26
TLR9Q9NR96 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TLR9Q9NR96 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.67■□□□□ 0.26
TLR9Q9NR96 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TLR9Q9NR96 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TLR9Q9NR96 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TLR9Q9NR96 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.67■□□□□ 0.26
TLR9Q9NR96 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TLR9Q9NR96 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TLR9Q9NR96 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
TLR9Q9NR96 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.67■□□□□ 0.26
TLR9Q9NR96 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.67■□□□□ 0.26
TLR9Q9NR96 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TLR9Q9NR96 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
TLR9Q9NR96 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TLR9Q9NR96 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TLR9Q9NR96 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TLR9Q9NR96 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TLR9Q9NR96 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TLR9Q9NR96 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TLR9Q9NR96 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.66■□□□□ 0.26
TLR9Q9NR96 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TLR9Q9NR96 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TLR9Q9NR96 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TLR9Q9NR96 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TLR9Q9NR96 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TLR9Q9NR96 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TLR9Q9NR96 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TLR9Q9NR96 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TLR9Q9NR96 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TLR9Q9NR96 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TLR9Q9NR96 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.66■□□□□ 0.26
TLR9Q9NR96 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TLR9Q9NR96 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.66■□□□□ 0.26
TLR9Q9NR96 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.66■□□□□ 0.26
TLR9Q9NR96 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC16.66■□□□□ 0.26
TLR9Q9NR96 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.66■□□□□ 0.26
TLR9Q9NR96 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TLR9Q9NR96 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.66■□□□□ 0.26
TLR9Q9NR96 RNA5SP423-201ENST00000517127 109 ntBASIC16.66■□□□□ 0.26
TLR9Q9NR96 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TLR9Q9NR96 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
TLR9Q9NR96 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.66■□□□□ 0.26
TLR9Q9NR96 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.66■□□□□ 0.26
TLR9Q9NR96 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.66■□□□□ 0.26
TLR9Q9NR96 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TLR9Q9NR96 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.66■□□□□ 0.26
TLR9Q9NR96 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.66■□□□□ 0.26
TLR9Q9NR96 PPA1-206ENST00000625364 644 ntTSL 5 BASIC16.66■□□□□ 0.26
TLR9Q9NR96 AC008894.3-201ENST00000624324 3103 ntBASIC16.66■□□□□ 0.26
TLR9Q9NR96 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.66■□□□□ 0.26
TLR9Q9NR96 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TLR9Q9NR96 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TLR9Q9NR96 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TLR9Q9NR96 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TLR9Q9NR96 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TLR9Q9NR96 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TLR9Q9NR96 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TLR9Q9NR96 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TLR9Q9NR96 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TLR9Q9NR96 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TLR9Q9NR96 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TLR9Q9NR96 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.65■□□□□ 0.26
TLR9Q9NR96 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TLR9Q9NR96 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.65■□□□□ 0.26
TLR9Q9NR96 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TLR9Q9NR96 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TLR9Q9NR96 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
TLR9Q9NR96 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.65■□□□□ 0.26
TLR9Q9NR96 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TLR9Q9NR96 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TLR9Q9NR96 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TLR9Q9NR96 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TLR9Q9NR96 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TLR9Q9NR96 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TLR9Q9NR96 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TLR9Q9NR96 Z93015.1-201ENST00000451718 390 ntBASIC16.65■□□□□ 0.26
TLR9Q9NR96 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.65■□□□□ 0.26
TLR9Q9NR96 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.65■□□□□ 0.26
TLR9Q9NR96 AP001258.2-201ENST00000529891 490 ntBASIC16.65■□□□□ 0.26
TLR9Q9NR96 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC16.65■□□□□ 0.26
TLR9Q9NR96 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms