Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SLIRPQ9GZT3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 BNIP3P18-201ENST00000593976 575 ntBASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.91□□□□□ -0.18
SLIRPQ9GZT3 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 PI4KAP1-204ENST00000612579 1703 ntBASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 ABCD1P5-201ENST00000445663 754 ntBASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 FAM201B-201ENST00000458407 597 ntBASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 AC096582.2-201ENST00000510860 516 ntBASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 AC010203.1-204ENST00000548782 407 ntBASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 METTL23-204ENST00000586752 904 ntTSL 2 BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 TMEM191A-211ENST00000637163 1067 ntBASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SLIRPQ9GZT3 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms