Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 SETP11-201ENST00000473027 690 ntBASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 AC009078.1-201ENST00000474978 783 ntBASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 VPS26AP1-201ENST00000483197 979 ntBASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 NPM1P27-201ENST00000502784 830 ntBASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 AC098799.3-201ENST00000506095 438 ntBASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 AC008588.1-201ENST00000514867 462 ntTSL 3 BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 HPRT1P3-201ENST00000539521 576 ntBASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 AP000619.1-201ENST00000540293 1000 ntBASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 AC124947.2-202ENST00000552735 133 ntBASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 AC087465.1-201ENST00000560574 245 ntBASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 AL359711.2-201ENST00000563105 872 ntBASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 AC006120.1-201ENST00000579375 546 ntBASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 AC005154.1-223ENST00000584372 547 ntTSL 5 BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 AL009028.1-201ENST00000604895 802 ntBASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 AC008536.2-201ENST00000607284 349 ntBASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 AC233992.3-201ENST00000607491 485 ntBASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 CEACAM5-209ENST00000616453 1160 ntTSL 5 BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 LYZL6-203ENST00000618542 917 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 AC009248.2-201ENST00000619826 254 ntBASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 AC005383.1-201ENST00000622689 534 ntBASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 AC087359.1-201ENST00000508335 1740 ntBASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 DCAKD-202ENST00000342350 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 DCAKD-203ENST00000452796 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 C1D-202ENST00000407324 1379 ntTSL 3 BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 LINC02267-201ENST00000513393 1687 ntTSL 3 BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 CHEK1-218ENST00000544373 1653 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 AP5M1-202ENST00000431972 1815 ntTSL 2 BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 ZNF33BP1-201ENST00000452497 1834 ntBASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
KRTAP3-3Q9BYR6 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 PIN4-201ENST00000218432 1780 ntTSL 2 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 SSX6-202ENST00000412590 1461 ntTSL 2 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 SLMAP-219ENST00000494088 1305 ntTSL 2 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 KNOP1P2-201ENST00000605379 1317 ntBASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 Y_RNA.133-201ENST00000363428 110 ntBASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 MS4A13-202ENST00000378186 928 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 MT-TG-201ENST00000387429 68 ntBASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 HLA-DRA-202ENST00000395388 1280 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 AC002524.1-201ENST00000411687 547 ntBASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 RANP6-201ENST00000413691 644 ntBASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 AC092042.2-201ENST00000417304 331 ntBASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 SETP9-201ENST00000423837 832 ntBASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 MTND4P24-201ENST00000424002 397 ntBASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 AL009174.1-201ENST00000426577 416 ntBASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 AC112492.2-201ENST00000432774 1030 ntBASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 MS4A13-203ENST00000437058 751 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 AL138720.1-202ENST00000437648 1017 ntTSL 5 BASIC10.11□□□□□ -0.79
KRTAP3-3Q9BYR6 AC016691.1-201ENST00000441321 413 ntBASIC10.11□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms