Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC015967.2-201ENST00000624092 234 ntBASIC18.95■□□□□ 0.62
RTFDC1Q9BY42 AC006435.4-201ENST00000625037 234 ntBASIC18.95■□□□□ 0.62
RTFDC1Q9BY42 AL356737.1-201ENST00000634391 234 ntBASIC18.95■□□□□ 0.62
RTFDC1Q9BY42 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RTFDC1Q9BY42 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTFDC1Q9BY42 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTFDC1Q9BY42 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTFDC1Q9BY42 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.95■□□□□ 0.62
RTFDC1Q9BY42 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTFDC1Q9BY42 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTFDC1Q9BY42 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTFDC1Q9BY42 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTFDC1Q9BY42 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RTFDC1Q9BY42 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 HNRNPA1P32-201ENST00000396326 963 ntBASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 AL662890.1-201ENST00000396818 632 ntBASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 PTPA-218ENST00000435132 618 ntTSL 2 BASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 FLII-221ENST00000578558 2377 ntTSL 5 BASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
RTFDC1Q9BY42 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 AC079328.1-201ENST00000560358 952 ntBASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 AC148477.4-201ENST00000613430 1793 ntBASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 MTHFR-217ENST00000641820 1569 ntBASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
RTFDC1Q9BY42 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 AL662844.4-201ENST00000606367 2838 ntBASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 AL596087.1-201ENST00000400979 1969 ntBASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 NUS1P3-201ENST00000423502 862 ntBASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC18.92■□□□□ 0.62
RTFDC1Q9BY42 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms