Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 NME4-212ENST00000621774 904 ntTSL 3 BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 AC131902.2-201ENST00000566892 2172 ntBASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.35□□□□□ -0.43
NDUFAF3Q9BU61 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 ME2P1-201ENST00000426028 1970 ntBASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 AC243591.1-201ENST00000452967 1364 ntBASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 AL021920.2-201ENST00000624828 1351 ntBASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 AC106730.1-201ENST00000566722 1090 ntBASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 NKAPP1-205ENST00000585790 367 ntBASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 AC023511.2-201ENST00000618803 211 ntBASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 MIR1199-201ENST00000621445 119 ntBASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 AC073592.4-201ENST00000623827 446 ntBASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 AC116407.3-201ENST00000623905 1129 ntBASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 AL022326.1-202ENST00000641533 845 ntBASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 AP000867.4-201ENST00000641616 219 ntBASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 AC013726.1-201ENST00000563747 2285 ntBASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.34□□□□□ -0.43
NDUFAF3Q9BU61 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.33□□□□□ -0.43
NDUFAF3Q9BU61 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.33□□□□□ -0.43
NDUFAF3Q9BU61 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
NDUFAF3Q9BU61 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.43
NDUFAF3Q9BU61 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
NDUFAF3Q9BU61 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 FRMD8P1-201ENST00000440433 1524 ntBASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.33□□□□□ -0.44
NDUFAF3Q9BU61 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms