Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 C2orf27AP3-201ENST00000434123 579 ntBASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 AL354718.3-201ENST00000616414 581 ntBASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 CR382287.1-201ENST00000623954 586 ntBASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CDK5RAP2Q96SN8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDK5RAP2Q96SN8 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC18.23■□□□□ 0.51
CDK5RAP2Q96SN8 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.23■□□□□ 0.51
CDK5RAP2Q96SN8 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDK5RAP2Q96SN8 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDK5RAP2Q96SN8 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDK5RAP2Q96SN8 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDK5RAP2Q96SN8 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CDK5RAP2Q96SN8 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDK5RAP2Q96SN8 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDK5RAP2Q96SN8 BRWD1P1-201ENST00000401091 371 ntBASIC18.23■□□□□ 0.51
CDK5RAP2Q96SN8 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CDK5RAP2Q96SN8 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC18.23■□□□□ 0.51
CDK5RAP2Q96SN8 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC18.23■□□□□ 0.51
CDK5RAP2Q96SN8 AC004466.1-201ENST00000599515 1080 ntBASIC18.23■□□□□ 0.51
CDK5RAP2Q96SN8 AP005019.2-201ENST00000615104 511 ntBASIC18.23■□□□□ 0.51
CDK5RAP2Q96SN8 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CDK5RAP2Q96SN8 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC18.23■□□□□ 0.51
CDK5RAP2Q96SN8 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDK5RAP2Q96SN8 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDK5RAP2Q96SN8 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDK5RAP2Q96SN8 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDK5RAP2Q96SN8 AC092850.2-201ENST00000623821 2697 ntBASIC18.23■□□□□ 0.51
CDK5RAP2Q96SN8 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC18.23■□□□□ 0.51
CDK5RAP2Q96SN8 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC18.23■□□□□ 0.51
CDK5RAP2Q96SN8 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CDK5RAP2Q96SN8 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 ACKR1-201ENST00000368121 1240 ntBASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 PFN2-215ENST00000497148 743 ntTSL 4 BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 AC243960.2-201ENST00000600996 747 ntBASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 PRKN-211ENST00000615065 261 ntTSL 5 BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 AL645937.2-201ENST00000396808 931 ntBASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 GHSR-202ENST00000427970 912 ntBASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 HSPB1P2-201ENST00000448722 546 ntBASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
CDK5RAP2Q96SN8 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CDK5RAP2Q96SN8 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CDK5RAP2Q96SN8 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC18.21■□□□□ 0.51
CDK5RAP2Q96SN8 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms