Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
SNX18Q96RF0 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SNX18Q96RF0 BCAR1-209ENST00000546196 1340 ntBASIC14.49□□□□□ -0.09
SNX18Q96RF0 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNX18Q96RF0 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNX18Q96RF0 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SNX18Q96RF0 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SNX18Q96RF0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNX18Q96RF0 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
SNX18Q96RF0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SNX18Q96RF0 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SNX18Q96RF0 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNX18Q96RF0 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
SNX18Q96RF0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.49□□□□□ -0.09
SNX18Q96RF0 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SNX18Q96RF0 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.49□□□□□ -0.09
SNX18Q96RF0 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
SNX18Q96RF0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.49□□□□□ -0.09
SNX18Q96RF0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.49□□□□□ -0.09
SNX18Q96RF0 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.49□□□□□ -0.09
SNX18Q96RF0 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNX18Q96RF0 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNX18Q96RF0 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SNX18Q96RF0 AC079781.5-202ENST00000641784 3743 ntBASIC14.49□□□□□ -0.09
SNX18Q96RF0 AC007326.2-201ENST00000624224 7579 ntBASIC14.49□□□□□ -0.09
SNX18Q96RF0 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.49□□□□□ -0.09
SNX18Q96RF0 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
SNX18Q96RF0 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNX18Q96RF0 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.49□□□□□ -0.09
SNX18Q96RF0 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
SNX18Q96RF0 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SNX18Q96RF0 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SNX18Q96RF0 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SNX18Q96RF0 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SNX18Q96RF0 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNX18Q96RF0 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
SNX18Q96RF0 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SNX18Q96RF0 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SNX18Q96RF0 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.48□□□□□ -0.09
SNX18Q96RF0 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SNX18Q96RF0 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.48□□□□□ -0.09
SNX18Q96RF0 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNX18Q96RF0 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
SNX18Q96RF0 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.48□□□□□ -0.09
SNX18Q96RF0 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.48□□□□□ -0.09
SNX18Q96RF0 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNX18Q96RF0 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.48□□□□□ -0.09
SNX18Q96RF0 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
SNX18Q96RF0 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.48□□□□□ -0.09
SNX18Q96RF0 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SNX18Q96RF0 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SNX18Q96RF0 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNX18Q96RF0 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNX18Q96RF0 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SNX18Q96RF0 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNX18Q96RF0 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.48□□□□□ -0.09
SNX18Q96RF0 COA5-202ENST00000409997 557 ntTSL 4 BASIC14.48□□□□□ -0.09
SNX18Q96RF0 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.48□□□□□ -0.09
SNX18Q96RF0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.48□□□□□ -0.09
SNX18Q96RF0 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.48□□□□□ -0.09
SNX18Q96RF0 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SNX18Q96RF0 PRYP6-201ENST00000514804 343 ntBASIC14.48□□□□□ -0.09
SNX18Q96RF0 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.48□□□□□ -0.09
SNX18Q96RF0 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.48□□□□□ -0.09
SNX18Q96RF0 AP001160.2-201ENST00000596071 487 ntBASIC14.48□□□□□ -0.09
SNX18Q96RF0 AC068137.2-201ENST00000605408 478 ntBASIC14.48□□□□□ -0.09
SNX18Q96RF0 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNX18Q96RF0 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.48□□□□□ -0.09
SNX18Q96RF0 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SNX18Q96RF0 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
SNX18Q96RF0 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNX18Q96RF0 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNX18Q96RF0 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.48□□□□□ -0.09
SNX18Q96RF0 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.48□□□□□ -0.09
SNX18Q96RF0 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNX18Q96RF0 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SNX18Q96RF0 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNX18Q96RF0 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.48□□□□□ -0.09
SNX18Q96RF0 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNX18Q96RF0 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SNX18Q96RF0 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNX18Q96RF0 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.48□□□□□ -0.09
SNX18Q96RF0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.48□□□□□ -0.09
SNX18Q96RF0 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SNX18Q96RF0 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNX18Q96RF0 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SNX18Q96RF0 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNX18Q96RF0 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNX18Q96RF0 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SNX18Q96RF0 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNX18Q96RF0 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNX18Q96RF0 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
SNX18Q96RF0 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SNX18Q96RF0 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 137.8 ms