Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC3BQ96PB8 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.97■□□□□ 0.15
LRRC3BQ96PB8 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC3BQ96PB8 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC3BQ96PB8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC3BQ96PB8 LINC02447-202ENST00000501888 2146 ntBASIC15.97■□□□□ 0.15
LRRC3BQ96PB8 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC3BQ96PB8 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.97■□□□□ 0.15
LRRC3BQ96PB8 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC3BQ96PB8 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC3BQ96PB8 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.97■□□□□ 0.15
LRRC3BQ96PB8 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC15.97■□□□□ 0.15
LRRC3BQ96PB8 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.97■□□□□ 0.15
LRRC3BQ96PB8 KRT18P25-201ENST00000508931 1278 ntBASIC15.97■□□□□ 0.15
LRRC3BQ96PB8 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC3BQ96PB8 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC15.97■□□□□ 0.15
LRRC3BQ96PB8 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.97■□□□□ 0.15
LRRC3BQ96PB8 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.97■□□□□ 0.15
LRRC3BQ96PB8 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.97■□□□□ 0.15
LRRC3BQ96PB8 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC15.97■□□□□ 0.15
LRRC3BQ96PB8 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC15.97■□□□□ 0.15
LRRC3BQ96PB8 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
LRRC3BQ96PB8 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC3BQ96PB8 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.97■□□□□ 0.15
LRRC3BQ96PB8 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC3BQ96PB8 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC3BQ96PB8 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC3BQ96PB8 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.97■□□□□ 0.15
LRRC3BQ96PB8 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.97■□□□□ 0.15
LRRC3BQ96PB8 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
LRRC3BQ96PB8 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC15.97■□□□□ 0.15
LRRC3BQ96PB8 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.97■□□□□ 0.15
LRRC3BQ96PB8 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
LRRC3BQ96PB8 AHCYP2-201ENST00000430630 1300 ntBASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 MIR1202-201ENST00000408529 83 ntBASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 KLF2P2-201ENST00000416807 1039 ntBASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 RNA5SP486-201ENST00000515961 83 ntBASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 AL139099.5-201ENST00000635274 300 ntBASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
LRRC3BQ96PB8 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC15.96■□□□□ 0.14
LRRC3BQ96PB8 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
LRRC3BQ96PB8 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
LRRC3BQ96PB8 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
LRRC3BQ96PB8 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.14
LRRC3BQ96PB8 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
LRRC3BQ96PB8 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC3BQ96PB8 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC3BQ96PB8 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.95■□□□□ 0.14
LRRC3BQ96PB8 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
LRRC3BQ96PB8 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC3BQ96PB8 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC15.95■□□□□ 0.14
LRRC3BQ96PB8 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC3BQ96PB8 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC3BQ96PB8 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC3BQ96PB8 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC3BQ96PB8 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC3BQ96PB8 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.95■□□□□ 0.14
LRRC3BQ96PB8 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC15.95■□□□□ 0.14
LRRC3BQ96PB8 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
LRRC3BQ96PB8 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC3BQ96PB8 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.95■□□□□ 0.14
LRRC3BQ96PB8 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC3BQ96PB8 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.95■□□□□ 0.14
LRRC3BQ96PB8 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
LRRC3BQ96PB8 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.95■□□□□ 0.14
LRRC3BQ96PB8 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.95■□□□□ 0.14
LRRC3BQ96PB8 PRKN-211ENST00000615065 261 ntTSL 5 BASIC15.95■□□□□ 0.14
LRRC3BQ96PB8 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC15.95■□□□□ 0.14
LRRC3BQ96PB8 AC112504.1-201ENST00000623415 1841 ntBASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms