Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 ABBA01031663.1-201ENST00000635630 790 ntBASIC16.67■□□□□ 0.26
CASD1Q96PB1 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.67■□□□□ 0.26
CASD1Q96PB1 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CASD1Q96PB1 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CASD1Q96PB1 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CASD1Q96PB1 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CASD1Q96PB1 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.67■□□□□ 0.26
CASD1Q96PB1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CASD1Q96PB1 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CASD1Q96PB1 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.67■□□□□ 0.26
CASD1Q96PB1 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CASD1Q96PB1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CASD1Q96PB1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
CASD1Q96PB1 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.67■□□□□ 0.26
CASD1Q96PB1 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.67■□□□□ 0.26
CASD1Q96PB1 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
CASD1Q96PB1 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CASD1Q96PB1 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CASD1Q96PB1 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CASD1Q96PB1 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CASD1Q96PB1 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
CASD1Q96PB1 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CASD1Q96PB1 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.66■□□□□ 0.26
CASD1Q96PB1 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CASD1Q96PB1 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CASD1Q96PB1 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
CASD1Q96PB1 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CASD1Q96PB1 MIR1202-201ENST00000408529 83 ntBASIC16.66■□□□□ 0.26
CASD1Q96PB1 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.66■□□□□ 0.26
CASD1Q96PB1 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CASD1Q96PB1 AC006033.1-201ENST00000440505 426 ntBASIC16.66■□□□□ 0.26
CASD1Q96PB1 AC245100.3-201ENST00000441281 285 ntBASIC16.66■□□□□ 0.26
CASD1Q96PB1 AC114812.1-204ENST00000449669 728 ntBASIC16.66■□□□□ 0.26
CASD1Q96PB1 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.66■□□□□ 0.26
CASD1Q96PB1 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CASD1Q96PB1 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.66■□□□□ 0.26
CASD1Q96PB1 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CASD1Q96PB1 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.66■□□□□ 0.26
CASD1Q96PB1 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CASD1Q96PB1 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CASD1Q96PB1 AC006453.4-201ENST00000636949 1252 ntBASIC16.66■□□□□ 0.26
CASD1Q96PB1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CASD1Q96PB1 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.66■□□□□ 0.26
CASD1Q96PB1 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CASD1Q96PB1 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CASD1Q96PB1 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CASD1Q96PB1 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CASD1Q96PB1 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CASD1Q96PB1 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.66■□□□□ 0.26
CASD1Q96PB1 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.66■□□□□ 0.26
CASD1Q96PB1 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.66■□□□□ 0.26
CASD1Q96PB1 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CASD1Q96PB1 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CASD1Q96PB1 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CASD1Q96PB1 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC16.65■□□□□ 0.26
CASD1Q96PB1 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
CASD1Q96PB1 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.65■□□□□ 0.26
CASD1Q96PB1 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.65■□□□□ 0.26
CASD1Q96PB1 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.65■□□□□ 0.26
CASD1Q96PB1 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
CASD1Q96PB1 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASD1Q96PB1 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CASD1Q96PB1 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CASD1Q96PB1 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASD1Q96PB1 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.65■□□□□ 0.26
CASD1Q96PB1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.65■□□□□ 0.26
CASD1Q96PB1 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASD1Q96PB1 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.65■□□□□ 0.26
CASD1Q96PB1 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASD1Q96PB1 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASD1Q96PB1 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CASD1Q96PB1 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CASD1Q96PB1 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.65■□□□□ 0.26
CASD1Q96PB1 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC16.65■□□□□ 0.26
CASD1Q96PB1 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.65■□□□□ 0.26
CASD1Q96PB1 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.65■□□□□ 0.26
CASD1Q96PB1 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CASD1Q96PB1 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.65■□□□□ 0.26
CASD1Q96PB1 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.65■□□□□ 0.26
CASD1Q96PB1 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.65■□□□□ 0.26
CASD1Q96PB1 MIR4741-201ENST00000579822 90 ntBASIC16.65■□□□□ 0.26
CASD1Q96PB1 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASD1Q96PB1 KLK3-211ENST00000597483 810 ntTSL 2 BASIC16.65■□□□□ 0.26
CASD1Q96PB1 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.65■□□□□ 0.26
CASD1Q96PB1 AL139099.5-201ENST00000635274 300 ntBASIC16.65■□□□□ 0.26
CASD1Q96PB1 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASD1Q96PB1 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CASD1Q96PB1 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASD1Q96PB1 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASD1Q96PB1 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CASD1Q96PB1 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CASD1Q96PB1 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
CASD1Q96PB1 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CASD1Q96PB1 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.65■□□□□ 0.26
CASD1Q96PB1 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
CASD1Q96PB1 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.65■□□□□ 0.26
CASD1Q96PB1 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
CASD1Q96PB1 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
CASD1Q96PB1 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CASD1Q96PB1 LINC02447-202ENST00000501888 2146 ntBASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms