Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC12.88□□□□□ -0.35
ZNF48Q96MX3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 FUZ-207ENST00000526575 482 ntTSL 4 BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 RARRES2P5-201ENST00000564013 466 ntBASIC12.88□□□□□ -0.35
ZNF48Q96MX3 RRP7BP-205ENST00000566851 833 ntBASIC12.88□□□□□ -0.35
ZNF48Q96MX3 AC106886.1-201ENST00000568660 600 ntBASIC12.88□□□□□ -0.35
ZNF48Q96MX3 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 SPIB-207ENST00000597855 564 ntTSL 4 BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 CLK3P2-201ENST00000427566 1453 ntBASIC12.88□□□□□ -0.35
ZNF48Q96MX3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 AL691432.1-201ENST00000596308 1422 ntBASIC12.88□□□□□ -0.35
ZNF48Q96MX3 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
ZNF48Q96MX3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 MIR658-201ENST00000385210 100 ntBASIC12.87□□□□□ -0.35
ZNF48Q96MX3 AZGP1P1-201ENST00000411909 902 ntBASIC12.87□□□□□ -0.35
ZNF48Q96MX3 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 RHOA-206ENST00000454011 889 ntTSL 2 BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 SUOX-214ENST00000551841 906 ntTSL 3 BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 TMEM261P1-201ENST00000604899 340 ntBASIC12.87□□□□□ -0.35
ZNF48Q96MX3 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
ZNF48Q96MX3 Z97205.2-201ENST00000564697 1639 ntBASIC12.87□□□□□ -0.35
ZNF48Q96MX3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms