Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AC232323.1-201ENST00000540724 2099 ntBASIC18.36■□□□□ 0.53
CHAMP1Q96JM3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHAMP1Q96JM3 REXO1L5P-201ENST00000622260 2098 ntBASIC18.36■□□□□ 0.53
CHAMP1Q96JM3 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHAMP1Q96JM3 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHAMP1Q96JM3 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CHAMP1Q96JM3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHAMP1Q96JM3 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CHAMP1Q96JM3 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC18.36■□□□□ 0.53
CHAMP1Q96JM3 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CHAMP1Q96JM3 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC18.36■□□□□ 0.53
CHAMP1Q96JM3 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHAMP1Q96JM3 USP35-204ENST00000530267 2419 ntTSL 2 BASIC18.35■□□□□ 0.53
CHAMP1Q96JM3 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHAMP1Q96JM3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHAMP1Q96JM3 AC005089.1-201ENST00000619486 2241 ntBASIC18.35■□□□□ 0.53
CHAMP1Q96JM3 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHAMP1Q96JM3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHAMP1Q96JM3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CHAMP1Q96JM3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHAMP1Q96JM3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHAMP1Q96JM3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC18.35■□□□□ 0.53
CHAMP1Q96JM3 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC18.35■□□□□ 0.53
CHAMP1Q96JM3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC18.35■□□□□ 0.53
CHAMP1Q96JM3 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CHAMP1Q96JM3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.35■□□□□ 0.53
CHAMP1Q96JM3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CHAMP1Q96JM3 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHAMP1Q96JM3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.35■□□□□ 0.53
CHAMP1Q96JM3 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHAMP1Q96JM3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHAMP1Q96JM3 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHAMP1Q96JM3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHAMP1Q96JM3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.35■□□□□ 0.53
CHAMP1Q96JM3 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.35■□□□□ 0.53
CHAMP1Q96JM3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.35■□□□□ 0.53
CHAMP1Q96JM3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC18.35■□□□□ 0.53
CHAMP1Q96JM3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.35■□□□□ 0.53
CHAMP1Q96JM3 AC073389.1-201ENST00000595595 795 ntBASIC18.35■□□□□ 0.53
CHAMP1Q96JM3 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.35■□□□□ 0.53
CHAMP1Q96JM3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CHAMP1Q96JM3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHAMP1Q96JM3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHAMP1Q96JM3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CHAMP1Q96JM3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.35■□□□□ 0.53
CHAMP1Q96JM3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 AC068137.2-201ENST00000605408 478 ntBASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CHAMP1Q96JM3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.33■□□□□ 0.53
CHAMP1Q96JM3 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHAMP1Q96JM3 AL390755.1-201ENST00000623716 2027 ntBASIC18.33■□□□□ 0.53
CHAMP1Q96JM3 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18.33■□□□□ 0.53
CHAMP1Q96JM3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.33■□□□□ 0.53
CHAMP1Q96JM3 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC18.33■□□□□ 0.53
CHAMP1Q96JM3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHAMP1Q96JM3 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC18.33■□□□□ 0.53
CHAMP1Q96JM3 LINC01101-201ENST00000622953 1884 ntBASIC18.33■□□□□ 0.53
CHAMP1Q96JM3 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CHAMP1Q96JM3 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CHAMP1Q96JM3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CHAMP1Q96JM3 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms