Protein–RNA interactions for Protein: Q92575

UBXN4, UBX domain-containing protein 4, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4Q92575 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
UBXN4Q92575 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC17.11■□□□□ 0.33
UBXN4Q92575 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBXN4Q92575 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBXN4Q92575 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBXN4Q92575 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBXN4Q92575 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.11■□□□□ 0.33
UBXN4Q92575 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
UBXN4Q92575 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBXN4Q92575 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
UBXN4Q92575 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBXN4Q92575 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.11■□□□□ 0.33
UBXN4Q92575 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.11■□□□□ 0.33
UBXN4Q92575 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBXN4Q92575 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.11■□□□□ 0.33
UBXN4Q92575 HAUS4P1-201ENST00000406739 1145 ntBASIC17.11■□□□□ 0.33
UBXN4Q92575 ABCD1P5-201ENST00000445663 754 ntBASIC17.11■□□□□ 0.33
UBXN4Q92575 FAM197Y8-203ENST00000450145 560 ntBASIC17.11■□□□□ 0.33
UBXN4Q92575 SCARNA2-201ENST00000458748 420 ntBASIC17.11■□□□□ 0.33
UBXN4Q92575 AF186996.4-201ENST00000467186 377 ntBASIC17.11■□□□□ 0.33
UBXN4Q92575 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.11■□□□□ 0.33
UBXN4Q92575 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.11■□□□□ 0.33
UBXN4Q92575 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.11■□□□□ 0.33
UBXN4Q92575 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.11■□□□□ 0.33
UBXN4Q92575 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.11■□□□□ 0.33
UBXN4Q92575 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBXN4Q92575 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.11■□□□□ 0.33
UBXN4Q92575 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC17.11■□□□□ 0.33
UBXN4Q92575 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBXN4Q92575 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBXN4Q92575 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.11■□□□□ 0.33
UBXN4Q92575 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBXN4Q92575 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC17.11■□□□□ 0.33
UBXN4Q92575 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBXN4Q92575 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
UBXN4Q92575 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBXN4Q92575 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBXN4Q92575 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC17.11■□□□□ 0.33
UBXN4Q92575 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
UBXN4Q92575 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
UBXN4Q92575 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
UBXN4Q92575 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBXN4Q92575 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBXN4Q92575 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC17.1■□□□□ 0.33
UBXN4Q92575 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBXN4Q92575 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBXN4Q92575 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBXN4Q92575 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
UBXN4Q92575 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
UBXN4Q92575 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBXN4Q92575 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
UBXN4Q92575 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
UBXN4Q92575 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.1■□□□□ 0.33
UBXN4Q92575 AC011477.6-201ENST00000604980 1927 ntBASIC17.1■□□□□ 0.33
UBXN4Q92575 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.1■□□□□ 0.33
UBXN4Q92575 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBXN4Q92575 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBXN4Q92575 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBXN4Q92575 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBXN4Q92575 MRPL3P1-201ENST00000400109 1033 ntBASIC17.1■□□□□ 0.33
UBXN4Q92575 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.1■□□□□ 0.33
UBXN4Q92575 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
UBXN4Q92575 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBXN4Q92575 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.1■□□□□ 0.33
UBXN4Q92575 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.1■□□□□ 0.33
UBXN4Q92575 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.1■□□□□ 0.33
UBXN4Q92575 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.1■□□□□ 0.33
UBXN4Q92575 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.1■□□□□ 0.33
UBXN4Q92575 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBXN4Q92575 MTDHP3-201ENST00000594186 672 ntBASIC17.1■□□□□ 0.33
UBXN4Q92575 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.1■□□□□ 0.33
UBXN4Q92575 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBXN4Q92575 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.1■□□□□ 0.33
UBXN4Q92575 TP73-AS1-207ENST00000624167 988 ntBASIC17.1■□□□□ 0.33
UBXN4Q92575 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.1■□□□□ 0.33
UBXN4Q92575 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC17.1■□□□□ 0.33
UBXN4Q92575 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
UBXN4Q92575 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBXN4Q92575 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.1■□□□□ 0.33
UBXN4Q92575 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
UBXN4Q92575 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
UBXN4Q92575 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
UBXN4Q92575 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBXN4Q92575 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBXN4Q92575 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBXN4Q92575 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBXN4Q92575 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UBXN4Q92575 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UBXN4Q92575 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.09■□□□□ 0.33
UBXN4Q92575 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UBXN4Q92575 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC17.09■□□□□ 0.33
UBXN4Q92575 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBXN4Q92575 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBXN4Q92575 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBXN4Q92575 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC17.09■□□□□ 0.33
UBXN4Q92575 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
UBXN4Q92575 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
UBXN4Q92575 AC087386.2-201ENST00000623212 4637 ntBASIC17.09■□□□□ 0.33
UBXN4Q92575 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC17.09■□□□□ 0.33
UBXN4Q92575 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms