Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RAPGEF4Q8WZA2 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
RAPGEF4Q8WZA2 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
RAPGEF4Q8WZA2 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
RAPGEF4Q8WZA2 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAPGEF4Q8WZA2 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
RAPGEF4Q8WZA2 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAPGEF4Q8WZA2 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
RAPGEF4Q8WZA2 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
RAPGEF4Q8WZA2 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAPGEF4Q8WZA2 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAPGEF4Q8WZA2 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAPGEF4Q8WZA2 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC20.51■□□□□ 0.87
RAPGEF4Q8WZA2 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAPGEF4Q8WZA2 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAPGEF4Q8WZA2 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAPGEF4Q8WZA2 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAPGEF4Q8WZA2 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAPGEF4Q8WZA2 MIR1202-201ENST00000408529 83 ntBASIC20.51■□□□□ 0.87
RAPGEF4Q8WZA2 BTBD6P1-201ENST00000412176 1267 ntBASIC20.51■□□□□ 0.87
RAPGEF4Q8WZA2 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAPGEF4Q8WZA2 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RAPGEF4Q8WZA2 AC104306.2-201ENST00000451877 341 ntBASIC20.51■□□□□ 0.87
RAPGEF4Q8WZA2 AL590640.2-201ENST00000457038 527 ntBASIC20.51■□□□□ 0.87
RAPGEF4Q8WZA2 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC20.51■□□□□ 0.87
RAPGEF4Q8WZA2 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAPGEF4Q8WZA2 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RAPGEF4Q8WZA2 AP001258.2-201ENST00000529891 490 ntBASIC20.51■□□□□ 0.87
RAPGEF4Q8WZA2 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC20.51■□□□□ 0.87
RAPGEF4Q8WZA2 TBCB-211ENST00000589996 724 ntTSL 3 BASIC20.51■□□□□ 0.87
RAPGEF4Q8WZA2 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.51■□□□□ 0.87
RAPGEF4Q8WZA2 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RAPGEF4Q8WZA2 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAPGEF4Q8WZA2 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAPGEF4Q8WZA2 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC20.51■□□□□ 0.87
RAPGEF4Q8WZA2 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
RAPGEF4Q8WZA2 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RAPGEF4Q8WZA2 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC20.51■□□□□ 0.87
RAPGEF4Q8WZA2 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 KLK3-211ENST00000597483 810 ntTSL 2 BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 GPR39-203ENST00000622084 900 ntTSL 5 BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC20.5■□□□□ 0.87
RAPGEF4Q8WZA2 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAPGEF4Q8WZA2 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RAPGEF4Q8WZA2 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RAPGEF4Q8WZA2 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAPGEF4Q8WZA2 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAPGEF4Q8WZA2 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAPGEF4Q8WZA2 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RAPGEF4Q8WZA2 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC20.49■□□□□ 0.87
RAPGEF4Q8WZA2 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RAPGEF4Q8WZA2 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAPGEF4Q8WZA2 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAPGEF4Q8WZA2 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC20.49■□□□□ 0.87
RAPGEF4Q8WZA2 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAPGEF4Q8WZA2 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
RAPGEF4Q8WZA2 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
RAPGEF4Q8WZA2 AC007969.1-201ENST00000433675 447 ntBASIC20.49■□□□□ 0.87
RAPGEF4Q8WZA2 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC20.49■□□□□ 0.87
RAPGEF4Q8WZA2 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC20.49■□□□□ 0.87
RAPGEF4Q8WZA2 AC006453.4-201ENST00000636949 1252 ntBASIC20.49■□□□□ 0.87
RAPGEF4Q8WZA2 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RAPGEF4Q8WZA2 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
RAPGEF4Q8WZA2 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC20.49■□□□□ 0.87
RAPGEF4Q8WZA2 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RAPGEF4Q8WZA2 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RAPGEF4Q8WZA2 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms