Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
U2AF1L4Q8WU68 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
U2AF1L4Q8WU68 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
U2AF1L4Q8WU68 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
U2AF1L4Q8WU68 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.06■□□□□ 0.48
U2AF1L4Q8WU68 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
U2AF1L4Q8WU68 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.06■□□□□ 0.48
U2AF1L4Q8WU68 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC18.06■□□□□ 0.48
U2AF1L4Q8WU68 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.06■□□□□ 0.48
U2AF1L4Q8WU68 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
U2AF1L4Q8WU68 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
U2AF1L4Q8WU68 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 MIR663B-201ENST00000408361 115 ntBASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 FTH1P14-201ENST00000482930 551 ntBASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 AP001258.2-201ENST00000529891 490 ntBASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 ENPP7P5-201ENST00000541031 1031 ntBASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 AC079328.1-201ENST00000560358 952 ntBASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
U2AF1L4Q8WU68 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 AC026954.1-201ENST00000429771 1293 ntBASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 BRI3BPP1-201ENST00000594224 787 ntBASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 AL022328.3-201ENST00000607943 679 ntBASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 AC026691.1-201ENST00000602502 2017 ntBASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
U2AF1L4Q8WU68 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms