Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CCDC33Q8N5R6 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 GNAQP1-201ENST00000444815 1067 ntBASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 MEIS3P1-201ENST00000495167 958 ntBASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 AL079307.3-201ENST00000556114 283 ntBASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 MIR4321-201ENST00000592276 80 ntBASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 AL132655.2-201ENST00000596276 594 ntBASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 AL133215.2-201ENST00000609242 977 ntBASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 AC004840.1-201ENST00000636359 365 ntBASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 AC018892.3-201ENST00000623986 2499 ntBASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CCDC33Q8N5R6 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 MIR648-201ENST00000385046 94 ntBASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 HAUS4P1-201ENST00000406739 1145 ntBASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 AC135586.1-201ENST00000539323 574 ntBASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 AC061975.2-201ENST00000581722 295 ntBASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CCDC33Q8N5R6 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CCDC33Q8N5R6 OR8S1-201ENST00000310194 1080 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms