Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC007967.4-201ENST00000614700 386 ntBASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 AC009090.5-201ENST00000624886 2285 ntBASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDKL3Q8IVW4 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDKL3Q8IVW4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.27■□□□□ 0.19
CDKL3Q8IVW4 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CDKL3Q8IVW4 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CDKL3Q8IVW4 AC103702.1-201ENST00000548801 2630 ntBASIC16.27■□□□□ 0.19
CDKL3Q8IVW4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CDKL3Q8IVW4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 DBET-201ENST00000630918 3363 ntBASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 AC023141.5-201ENST00000458585 616 ntBASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 AC026150.2-201ENST00000564693 1156 ntBASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 AC112693.3-201ENST00000624819 1983 ntBASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 AL035456.1-201ENST00000456064 1369 ntBASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CDKL3Q8IVW4 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 SPDYE17-201ENST00000412399 783 ntBASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 AC211486.1-202ENST00000416371 468 ntBASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 AC211476.1-201ENST00000503899 468 ntBASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 C18orf15-201ENST00000623680 2534 ntBASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CDKL3Q8IVW4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms