Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 AC025279.2-201ENST00000569730 653 ntBASIC17.03■□□□□ 0.32
HERC6Q8IVU3 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 AL008638.5-201ENST00000623814 1298 ntBASIC17.03■□□□□ 0.32
HERC6Q8IVU3 AC244452.3-201ENST00000636814 210 ntBASIC17.03■□□□□ 0.32
HERC6Q8IVU3 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
HERC6Q8IVU3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HERC6Q8IVU3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.02■□□□□ 0.32
HERC6Q8IVU3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HERC6Q8IVU3 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
HERC6Q8IVU3 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
HERC6Q8IVU3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HERC6Q8IVU3 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HERC6Q8IVU3 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
HERC6Q8IVU3 AL592424.1-201ENST00000563624 1536 ntBASIC17.02■□□□□ 0.32
HERC6Q8IVU3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
HERC6Q8IVU3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.02■□□□□ 0.32
HERC6Q8IVU3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.02■□□□□ 0.32
HERC6Q8IVU3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HERC6Q8IVU3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
HERC6Q8IVU3 RPS3-201ENST00000278572 907 ntTSL 3 BASIC17.02■□□□□ 0.32
HERC6Q8IVU3 AC006001.1-201ENST00000325130 474 ntBASIC17.02■□□□□ 0.32
HERC6Q8IVU3 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.32
HERC6Q8IVU3 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.02■□□□□ 0.32
HERC6Q8IVU3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.02■□□□□ 0.32
HERC6Q8IVU3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HERC6Q8IVU3 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HERC6Q8IVU3 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.02■□□□□ 0.32
HERC6Q8IVU3 AC000095.1-201ENST00000603208 874 ntBASIC17.02■□□□□ 0.32
HERC6Q8IVU3 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
HERC6Q8IVU3 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.02■□□□□ 0.32
HERC6Q8IVU3 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
HERC6Q8IVU3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HERC6Q8IVU3 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.02■□□□□ 0.32
HERC6Q8IVU3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HERC6Q8IVU3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
HERC6Q8IVU3 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HERC6Q8IVU3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.31
HERC6Q8IVU3 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HERC6Q8IVU3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HERC6Q8IVU3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HERC6Q8IVU3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.02■□□□□ 0.31
HERC6Q8IVU3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
HERC6Q8IVU3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
HERC6Q8IVU3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
HERC6Q8IVU3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HERC6Q8IVU3 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HERC6Q8IVU3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HERC6Q8IVU3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.31
HERC6Q8IVU3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.02■□□□□ 0.31
HERC6Q8IVU3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HERC6Q8IVU3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HERC6Q8IVU3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 PCDH8P1-201ENST00000428983 2773 ntBASIC17.01■□□□□ 0.31
HERC6Q8IVU3 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 GRN-222ENST00000639447 1314 ntTSL 2 BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 AC106886.4-201ENST00000623557 2502 ntBASIC17.01■□□□□ 0.31
HERC6Q8IVU3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
HERC6Q8IVU3 AC078925.2-201ENST00000624013 1973 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms