Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 AC105233.2-201ENST00000523697 349 ntBASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 AF228730.5-201ENST00000530288 346 ntBASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 AC024267.1-201ENST00000582320 895 ntBASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 SBF1P1-201ENST00000444527 5631 ntBASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 AC023157.3-201ENST00000619086 2088 ntBASIC16.77■□□□□ 0.28
CCDC50Q8IVM0 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC50Q8IVM0 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC50Q8IVM0 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CCDC50Q8IVM0 AC092127.1-201ENST00000567093 3455 ntBASIC16.77■□□□□ 0.28
CCDC50Q8IVM0 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CCDC50Q8IVM0 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC50Q8IVM0 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC50Q8IVM0 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC50Q8IVM0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC50Q8IVM0 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC50Q8IVM0 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
CCDC50Q8IVM0 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC50Q8IVM0 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.28
CCDC50Q8IVM0 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.77■□□□□ 0.28
CCDC50Q8IVM0 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CCDC50Q8IVM0 AC098859.1-201ENST00000502915 1238 ntBASIC16.77■□□□□ 0.28
CCDC50Q8IVM0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.77■□□□□ 0.28
CCDC50Q8IVM0 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.77■□□□□ 0.28
CCDC50Q8IVM0 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.77■□□□□ 0.28
CCDC50Q8IVM0 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC50Q8IVM0 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CCDC50Q8IVM0 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CCDC50Q8IVM0 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CCDC50Q8IVM0 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
CCDC50Q8IVM0 AL135744.1-201ENST00000565098 629 ntBASIC16.77■□□□□ 0.28
CCDC50Q8IVM0 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCDC50Q8IVM0 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.77■□□□□ 0.28
CCDC50Q8IVM0 SPTSSB-204ENST00000617024 1292 ntBASIC16.77■□□□□ 0.28
CCDC50Q8IVM0 AC087481.3-201ENST00000602886 1894 ntBASIC16.77■□□□□ 0.27
CCDC50Q8IVM0 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.77■□□□□ 0.27
CCDC50Q8IVM0 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC50Q8IVM0 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.77■□□□□ 0.27
CCDC50Q8IVM0 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.77■□□□□ 0.27
CCDC50Q8IVM0 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC50Q8IVM0 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC50Q8IVM0 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CCDC50Q8IVM0 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC50Q8IVM0 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.77■□□□□ 0.27
CCDC50Q8IVM0 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CCDC50Q8IVM0 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCDC50Q8IVM0 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 FDX1P1-201ENST00000449115 551 ntBASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 AC106730.1-201ENST00000566722 1090 ntBASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.76■□□□□ 0.27
CCDC50Q8IVM0 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms