Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.49■□□□□ 0.23
RFX6Q8HWS3 AC003101.2-201ENST00000612557 442 ntBASIC16.49■□□□□ 0.23
RFX6Q8HWS3 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.49■□□□□ 0.23
RFX6Q8HWS3 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFX6Q8HWS3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFX6Q8HWS3 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFX6Q8HWS3 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFX6Q8HWS3 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFX6Q8HWS3 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.49■□□□□ 0.23
RFX6Q8HWS3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFX6Q8HWS3 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RFX6Q8HWS3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.49■□□□□ 0.23
RFX6Q8HWS3 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RFX6Q8HWS3 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RFX6Q8HWS3 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.49■□□□□ 0.23
RFX6Q8HWS3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 AC009090.5-201ENST00000624886 2285 ntBASIC16.48■□□□□ 0.23
RFX6Q8HWS3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 RPSAP43-201ENST00000402237 625 ntBASIC16.48■□□□□ 0.23
RFX6Q8HWS3 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 AC018529.1-201ENST00000613063 361 ntBASIC16.48■□□□□ 0.23
RFX6Q8HWS3 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX6Q8HWS3 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 AC105021.1-202ENST00000570572 669 ntBASIC16.47■□□□□ 0.23
RFX6Q8HWS3 AC004835.2-201ENST00000603762 682 ntBASIC16.47■□□□□ 0.23
RFX6Q8HWS3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX6Q8HWS3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms