Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
ATG4DQ86TL0 AL109954.1-202ENST00000564051 2148 ntBASIC14.33□□□□□ -0.11
ATG4DQ86TL0 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ATG4DQ86TL0 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
ATG4DQ86TL0 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.33□□□□□ -0.11
ATG4DQ86TL0 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
ATG4DQ86TL0 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ATG4DQ86TL0 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
ATG4DQ86TL0 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ATG4DQ86TL0 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.33□□□□□ -0.12
ATG4DQ86TL0 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC14.33□□□□□ -0.12
ATG4DQ86TL0 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ATG4DQ86TL0 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ATG4DQ86TL0 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
ATG4DQ86TL0 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.33□□□□□ -0.12
ATG4DQ86TL0 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ATG4DQ86TL0 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.33□□□□□ -0.12
ATG4DQ86TL0 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.33□□□□□ -0.12
ATG4DQ86TL0 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ATG4DQ86TL0 AC107890.1-201ENST00000422478 521 ntBASIC14.33□□□□□ -0.12
ATG4DQ86TL0 TARDBPP1-201ENST00000442013 1203 ntBASIC14.33□□□□□ -0.12
ATG4DQ86TL0 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ATG4DQ86TL0 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.33□□□□□ -0.12
ATG4DQ86TL0 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.33□□□□□ -0.12
ATG4DQ86TL0 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ATG4DQ86TL0 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ATG4DQ86TL0 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ATG4DQ86TL0 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ATG4DQ86TL0 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
ATG4DQ86TL0 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ATG4DQ86TL0 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.33□□□□□ -0.12
ATG4DQ86TL0 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ATG4DQ86TL0 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ATG4DQ86TL0 AC144831.1-201ENST00000573312 2656 ntBASIC14.33□□□□□ -0.12
ATG4DQ86TL0 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.33□□□□□ -0.12
ATG4DQ86TL0 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
ATG4DQ86TL0 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
ATG4DQ86TL0 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
ATG4DQ86TL0 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
ATG4DQ86TL0 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ATG4DQ86TL0 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ATG4DQ86TL0 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 AC006486.2-201ENST00000624246 2199 ntBASIC14.32□□□□□ -0.12
ATG4DQ86TL0 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 C18orf15-201ENST00000623680 2534 ntBASIC14.32□□□□□ -0.12
ATG4DQ86TL0 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 RPL37AP1-201ENST00000412502 279 ntBASIC14.32□□□□□ -0.12
ATG4DQ86TL0 AC055876.3-201ENST00000431496 288 ntBASIC14.32□□□□□ -0.12
ATG4DQ86TL0 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 SERBP1P3-201ENST00000459980 809 ntBASIC14.32□□□□□ -0.12
ATG4DQ86TL0 HLA-V-204ENST00000476601 1289 ntBASIC14.32□□□□□ -0.12
ATG4DQ86TL0 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 AC067863.1-201ENST00000494933 530 ntBASIC14.32□□□□□ -0.12
ATG4DQ86TL0 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 MIR3197-201ENST00000582241 73 ntBASIC14.32□□□□□ -0.12
ATG4DQ86TL0 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 AC092364.2-202ENST00000597012 1073 ntBASIC14.32□□□□□ -0.12
ATG4DQ86TL0 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 AL096865.1-201ENST00000606796 927 ntBASIC14.32□□□□□ -0.12
ATG4DQ86TL0 AC138649.4-201ENST00000612222 287 ntBASIC14.32□□□□□ -0.12
ATG4DQ86TL0 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 MIR6069-201ENST00000620069 79 ntBASIC14.32□□□□□ -0.12
ATG4DQ86TL0 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 AC023157.3-201ENST00000619086 2088 ntBASIC14.32□□□□□ -0.12
ATG4DQ86TL0 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.32□□□□□ -0.12
ATG4DQ86TL0 AC138035.3-201ENST00000622706 2791 ntBASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms