Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC12.89□□□□□ -0.35
VPS13CQ709C8 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13CQ709C8 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13CQ709C8 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC12.89□□□□□ -0.35
VPS13CQ709C8 CFL1-206ENST00000527344 962 ntTSL 2 BASIC12.89□□□□□ -0.35
VPS13CQ709C8 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC12.89□□□□□ -0.35
VPS13CQ709C8 RN7SL713P-201ENST00000582127 302 ntBASIC12.89□□□□□ -0.35
VPS13CQ709C8 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC12.89□□□□□ -0.35
VPS13CQ709C8 AL138799.1-201ENST00000448213 1675 ntBASIC12.89□□□□□ -0.35
VPS13CQ709C8 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC12.89□□□□□ -0.35
VPS13CQ709C8 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13CQ709C8 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.89□□□□□ -0.35
VPS13CQ709C8 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13CQ709C8 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13CQ709C8 AC136759.1-202ENST00000530858 2194 ntBASIC12.89□□□□□ -0.35
VPS13CQ709C8 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13CQ709C8 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13CQ709C8 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13CQ709C8 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13CQ709C8 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13CQ709C8 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC12.89□□□□□ -0.35
VPS13CQ709C8 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13CQ709C8 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13CQ709C8 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
VPS13CQ709C8 Z97180.1-201ENST00000445173 988 ntBASIC12.89□□□□□ -0.35
VPS13CQ709C8 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC12.89□□□□□ -0.35
VPS13CQ709C8 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
VPS13CQ709C8 AL160314.3-201ENST00000556041 767 ntBASIC12.89□□□□□ -0.35
VPS13CQ709C8 AC141586.1-203ENST00000567242 366 ntBASIC12.89□□□□□ -0.35
VPS13CQ709C8 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC12.89□□□□□ -0.35
VPS13CQ709C8 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC12.89□□□□□ -0.35
VPS13CQ709C8 WT1-AS_6.1-201ENST00000614919 121 ntBASIC12.89□□□□□ -0.35
VPS13CQ709C8 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC12.89□□□□□ -0.35
VPS13CQ709C8 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC12.89□□□□□ -0.35
VPS13CQ709C8 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC12.89□□□□□ -0.35
VPS13CQ709C8 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
VPS13CQ709C8 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13CQ709C8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC12.88□□□□□ -0.35
VPS13CQ709C8 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13CQ709C8 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
VPS13CQ709C8 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
VPS13CQ709C8 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.88□□□□□ -0.35
VPS13CQ709C8 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
VPS13CQ709C8 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13CQ709C8 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.88□□□□□ -0.35
VPS13CQ709C8 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.88□□□□□ -0.35
VPS13CQ709C8 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13CQ709C8 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
VPS13CQ709C8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13CQ709C8 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.88□□□□□ -0.35
VPS13CQ709C8 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13CQ709C8 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13CQ709C8 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13CQ709C8 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13CQ709C8 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13CQ709C8 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC12.88□□□□□ -0.35
VPS13CQ709C8 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC12.88□□□□□ -0.35
VPS13CQ709C8 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13CQ709C8 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13CQ709C8 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.88□□□□□ -0.35
VPS13CQ709C8 AC243562.2-201ENST00000561247 970 ntBASIC12.88□□□□□ -0.35
VPS13CQ709C8 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC12.88□□□□□ -0.35
VPS13CQ709C8 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC12.88□□□□□ -0.35
VPS13CQ709C8 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13CQ709C8 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC12.88□□□□□ -0.35
VPS13CQ709C8 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13CQ709C8 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13CQ709C8 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13CQ709C8 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13CQ709C8 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13CQ709C8 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
VPS13CQ709C8 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13CQ709C8 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13CQ709C8 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.88□□□□□ -0.35
VPS13CQ709C8 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
VPS13CQ709C8 KLF2P2-201ENST00000416807 1039 ntBASIC12.88□□□□□ -0.35
VPS13CQ709C8 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC12.88□□□□□ -0.35
VPS13CQ709C8 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.88□□□□□ -0.35
VPS13CQ709C8 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC12.88□□□□□ -0.35
VPS13CQ709C8 AC004923.1-202ENST00000642106 209 ntBASIC12.88□□□□□ -0.35
VPS13CQ709C8 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VPS13CQ709C8 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
VPS13CQ709C8 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VPS13CQ709C8 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VPS13CQ709C8 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.87□□□□□ -0.35
VPS13CQ709C8 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
VPS13CQ709C8 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
VPS13CQ709C8 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.87□□□□□ -0.35
VPS13CQ709C8 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VPS13CQ709C8 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
VPS13CQ709C8 AL596276.2-201ENST00000447525 331 ntBASIC12.87□□□□□ -0.35
VPS13CQ709C8 IGLV3-15-201ENST00000518356 244 ntBASIC12.87□□□□□ -0.35
VPS13CQ709C8 IQSEC3P1-201ENST00000538799 536 ntBASIC12.87□□□□□ -0.35
VPS13CQ709C8 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
VPS13CQ709C8 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.87□□□□□ -0.35
VPS13CQ709C8 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC12.87□□□□□ -0.35
VPS13CQ709C8 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
VPS13CQ709C8 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
VPS13CQ709C8 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
VPS13CQ709C8 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.87□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms