Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 MIR658-201ENST00000385210 100 ntBASIC17.11■□□□□ 0.33
CDC42EP1Q00587 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 MIR1909-201ENST00000411312 80 ntBASIC17.11■□□□□ 0.33
CDC42EP1Q00587 NUS1P3-201ENST00000423502 862 ntBASIC17.11■□□□□ 0.33
CDC42EP1Q00587 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 AC104989.1-201ENST00000519711 778 ntBASIC17.11■□□□□ 0.33
CDC42EP1Q00587 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 AC107373.2-201ENST00000607735 490 ntBASIC17.11■□□□□ 0.33
CDC42EP1Q00587 AP005019.2-201ENST00000615104 511 ntBASIC17.11■□□□□ 0.33
CDC42EP1Q00587 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 AC005252.2-201ENST00000624630 1141 ntBASIC17.11■□□□□ 0.33
CDC42EP1Q00587 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 AC134312.5-201ENST00000568031 1313 ntBASIC17.11■□□□□ 0.33
CDC42EP1Q00587 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CDC42EP1Q00587 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.1■□□□□ 0.33
CDC42EP1Q00587 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 AC022137.2-201ENST00000503482 481 ntBASIC17.1■□□□□ 0.33
CDC42EP1Q00587 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 AC133552.6-201ENST00000613406 534 ntBASIC17.1■□□□□ 0.33
CDC42EP1Q00587 COX11-210ENST00000639671 696 ntBASIC17.1■□□□□ 0.33
CDC42EP1Q00587 AL645728.2-202ENST00000641679 227 ntBASIC17.1■□□□□ 0.33
CDC42EP1Q00587 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 AL138799.1-201ENST00000448213 1675 ntBASIC17.1■□□□□ 0.33
CDC42EP1Q00587 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDC42EP1Q00587 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDC42EP1Q00587 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDC42EP1Q00587 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CDC42EP1Q00587 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CDC42EP1Q00587 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms