Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEP78395 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEP78395 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEP78395 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
PRAMEP78395 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PRAMEP78395 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.01■□□□□ 0.15
PRAMEP78395 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEP78395 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
PRAMEP78395 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.01■□□□□ 0.15
PRAMEP78395 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.01■□□□□ 0.15
PRAMEP78395 AC023141.5-201ENST00000458585 616 ntBASIC16.01■□□□□ 0.15
PRAMEP78395 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.01■□□□□ 0.15
PRAMEP78395 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PRAMEP78395 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.01■□□□□ 0.15
PRAMEP78395 AC018529.1-201ENST00000613063 361 ntBASIC16.01■□□□□ 0.15
PRAMEP78395 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEP78395 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEP78395 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.01■□□□□ 0.15
PRAMEP78395 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEP78395 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEP78395 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEP78395 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
PRAMEP78395 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEP78395 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
PRAMEP78395 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEP78395 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEP78395 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEP78395 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
PRAMEP78395 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.01■□□□□ 0.15
PRAMEP78395 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEP78395 AC018892.3-201ENST00000623986 2499 ntBASIC16.01■□□□□ 0.15
PRAMEP78395 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEP78395 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRAMEP78395 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16■□□□□ 0.15
PRAMEP78395 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16■□□□□ 0.15
PRAMEP78395 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16■□□□□ 0.15
PRAMEP78395 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PRAMEP78395 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
PRAMEP78395 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16■□□□□ 0.15
PRAMEP78395 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PRAMEP78395 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
PRAMEP78395 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
PRAMEP78395 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16■□□□□ 0.15
PRAMEP78395 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PRAMEP78395 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PRAMEP78395 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
PRAMEP78395 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PRAMEP78395 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16■□□□□ 0.15
PRAMEP78395 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PRAMEP78395 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16■□□□□ 0.15
PRAMEP78395 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16■□□□□ 0.15
PRAMEP78395 CD81-202ENST00000381036 880 ntTSL 3 BASIC16■□□□□ 0.15
PRAMEP78395 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16■□□□□ 0.15
PRAMEP78395 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16■□□□□ 0.15
PRAMEP78395 CCDC74BP1-201ENST00000508880 1123 ntBASIC16■□□□□ 0.15
PRAMEP78395 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16■□□□□ 0.15
PRAMEP78395 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16■□□□□ 0.15
PRAMEP78395 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16■□□□□ 0.15
PRAMEP78395 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16■□□□□ 0.15
PRAMEP78395 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PRAMEP78395 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16■□□□□ 0.15
PRAMEP78395 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PRAMEP78395 AC003101.2-201ENST00000612557 442 ntBASIC16■□□□□ 0.15
PRAMEP78395 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16■□□□□ 0.15
PRAMEP78395 AC009093.7-201ENST00000623853 1223 ntBASIC16■□□□□ 0.15
PRAMEP78395 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PRAMEP78395 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PRAMEP78395 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
PRAMEP78395 KRT8P37-201ENST00000451609 1420 ntBASIC16■□□□□ 0.15
PRAMEP78395 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PRAMEP78395 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PRAMEP78395 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
PRAMEP78395 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PRAMEP78395 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
PRAMEP78395 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16■□□□□ 0.15
PRAMEP78395 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16■□□□□ 0.15
PRAMEP78395 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16■□□□□ 0.15
PRAMEP78395 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.99■□□□□ 0.15
PRAMEP78395 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRAMEP78395 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.99■□□□□ 0.15
PRAMEP78395 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRAMEP78395 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRAMEP78395 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRAMEP78395 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
PRAMEP78395 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.99■□□□□ 0.15
PRAMEP78395 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
PRAMEP78395 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRAMEP78395 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
PRAMEP78395 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRAMEP78395 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.99■□□□□ 0.15
PRAMEP78395 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
PRAMEP78395 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.99■□□□□ 0.15
PRAMEP78395 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
PRAMEP78395 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PRAMEP78395 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PRAMEP78395 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
PRAMEP78395 KRT18P13-201ENST00000400056 1290 ntBASIC15.99■□□□□ 0.15
PRAMEP78395 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.99■□□□□ 0.15
PRAMEP78395 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.99■□□□□ 0.15
PRAMEP78395 AC254562.1-201ENST00000417586 456 ntBASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms