Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H3AP68431 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.82□□□□□ -0.2
HIST1H3AP68431 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H3AP68431 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H3AP68431 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.82□□□□□ -0.2
HIST1H3AP68431 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.82□□□□□ -0.2
HIST1H3AP68431 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H3AP68431 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.82□□□□□ -0.2
HIST1H3AP68431 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.82□□□□□ -0.2
HIST1H3AP68431 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.82□□□□□ -0.2
HIST1H3AP68431 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H3AP68431 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.82□□□□□ -0.2
HIST1H3AP68431 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H3AP68431 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.82□□□□□ -0.2
HIST1H3AP68431 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.82□□□□□ -0.2
HIST1H3AP68431 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H3AP68431 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H3AP68431 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.82□□□□□ -0.2
HIST1H3AP68431 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.82□□□□□ -0.2
HIST1H3AP68431 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.82□□□□□ -0.2
HIST1H3AP68431 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
HIST1H3AP68431 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H3AP68431 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H3AP68431 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
HIST1H3AP68431 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.82□□□□□ -0.2
HIST1H3AP68431 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.82□□□□□ -0.2
HIST1H3AP68431 TSEN15P1-201ENST00000423257 515 ntBASIC13.82□□□□□ -0.2
HIST1H3AP68431 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.82□□□□□ -0.2
HIST1H3AP68431 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H3AP68431 TARDBPP1-201ENST00000442013 1203 ntBASIC13.82□□□□□ -0.2
HIST1H3AP68431 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.82□□□□□ -0.2
HIST1H3AP68431 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H3AP68431 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H3AP68431 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
HIST1H3AP68431 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
HIST1H3AP68431 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
HIST1H3AP68431 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC13.82□□□□□ -0.2
HIST1H3AP68431 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.82□□□□□ -0.2
HIST1H3AP68431 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H3AP68431 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
HIST1H3AP68431 AL589739.1-201ENST00000607720 493 ntBASIC13.82□□□□□ -0.2
HIST1H3AP68431 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H3AP68431 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.82□□□□□ -0.2
HIST1H3AP68431 AC079781.4-201ENST00000641908 219 ntBASIC13.82□□□□□ -0.2
HIST1H3AP68431 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H3AP68431 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H3AP68431 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.82□□□□□ -0.2
HIST1H3AP68431 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H3AP68431 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H3AP68431 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H3AP68431 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.82□□□□□ -0.2
HIST1H3AP68431 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC13.82□□□□□ -0.2
HIST1H3AP68431 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H3AP68431 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.82□□□□□ -0.2
HIST1H3AP68431 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
HIST1H3AP68431 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.82□□□□□ -0.2
HIST1H3AP68431 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H3AP68431 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
HIST1H3AP68431 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H3AP68431 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
HIST1H3AP68431 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HIST1H3AP68431 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H3AP68431 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.81□□□□□ -0.2
HIST1H3AP68431 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H3AP68431 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
HIST1H3AP68431 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H3AP68431 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H3AP68431 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H3AP68431 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
HIST1H3AP68431 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H3AP68431 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H3AP68431 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H3AP68431 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.81□□□□□ -0.2
HIST1H3AP68431 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H3AP68431 RPL37AP1-201ENST00000412502 279 ntBASIC13.81□□□□□ -0.2
HIST1H3AP68431 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.81□□□□□ -0.2
HIST1H3AP68431 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC13.81□□□□□ -0.2
HIST1H3AP68431 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H3AP68431 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
HIST1H3AP68431 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H3AP68431 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.81□□□□□ -0.2
HIST1H3AP68431 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H3AP68431 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H3AP68431 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.81□□□□□ -0.2
HIST1H3AP68431 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.81□□□□□ -0.2
HIST1H3AP68431 AC015911.4-201ENST00000588022 1070 ntBASIC13.81□□□□□ -0.2
HIST1H3AP68431 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.81□□□□□ -0.2
HIST1H3AP68431 AC023511.2-201ENST00000618803 211 ntBASIC13.81□□□□□ -0.2
HIST1H3AP68431 MIR6069-201ENST00000620069 79 ntBASIC13.81□□□□□ -0.2
HIST1H3AP68431 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H3AP68431 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.81□□□□□ -0.2
HIST1H3AP68431 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H3AP68431 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H3AP68431 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.81□□□□□ -0.2
HIST1H3AP68431 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
HIST1H3AP68431 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
HIST1H3AP68431 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HIST1H3AP68431 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
HIST1H3AP68431 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.81□□□□□ -0.2
HIST1H3AP68431 API5-202ENST00000420461 2009 ntTSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms