Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 AC011477.6-201ENST00000604980 1927 ntBASIC14.56□□□□□ -0.08
CDH11P55287 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH11P55287 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.56□□□□□ -0.08
CDH11P55287 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH11P55287 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.56□□□□□ -0.08
CDH11P55287 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.56□□□□□ -0.08
CDH11P55287 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH11P55287 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CDH11P55287 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
CDH11P55287 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH11P55287 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH11P55287 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH11P55287 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH11P55287 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH11P55287 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH11P55287 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
CDH11P55287 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH11P55287 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH11P55287 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
CDH11P55287 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH11P55287 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH11P55287 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH11P55287 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH11P55287 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH11P55287 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.56□□□□□ -0.08
CDH11P55287 AC140658.5-201ENST00000438532 169 ntBASIC14.56□□□□□ -0.08
CDH11P55287 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.56□□□□□ -0.08
CDH11P55287 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
CDH11P55287 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH11P55287 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC14.56□□□□□ -0.08
CDH11P55287 MIR3909-201ENST00000579518 119 ntBASIC14.56□□□□□ -0.08
CDH11P55287 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.56□□□□□ -0.08
CDH11P55287 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH11P55287 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.56□□□□□ -0.08
CDH11P55287 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.56□□□□□ -0.08
CDH11P55287 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
CDH11P55287 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH11P55287 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH11P55287 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH11P55287 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH11P55287 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH11P55287 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.56□□□□□ -0.08
CDH11P55287 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH11P55287 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CDH11P55287 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH11P55287 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH11P55287 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH11P55287 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH11P55287 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH11P55287 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH11P55287 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.56□□□□□ -0.08
CDH11P55287 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH11P55287 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH11P55287 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH11P55287 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
CDH11P55287 FAM45BP-202ENST00000592932 1624 ntBASIC14.55□□□□□ -0.08
CDH11P55287 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH11P55287 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH11P55287 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH11P55287 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH11P55287 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH11P55287 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH11P55287 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH11P55287 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH11P55287 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH11P55287 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH11P55287 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH11P55287 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CDH11P55287 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
CDH11P55287 AC097376.2-205ENST00000610159 5334 ntBASIC14.55□□□□□ -0.08
CDH11P55287 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH11P55287 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH11P55287 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH11P55287 AL355306.1-201ENST00000415580 579 ntBASIC14.55□□□□□ -0.08
CDH11P55287 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.55□□□□□ -0.08
CDH11P55287 TSEN15P1-201ENST00000423257 515 ntBASIC14.55□□□□□ -0.08
CDH11P55287 AC245100.5-201ENST00000452108 331 ntBASIC14.55□□□□□ -0.08
CDH11P55287 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC14.55□□□□□ -0.08
CDH11P55287 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.55□□□□□ -0.08
CDH11P55287 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC14.55□□□□□ -0.08
CDH11P55287 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC14.55□□□□□ -0.08
CDH11P55287 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.55□□□□□ -0.08
CDH11P55287 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.55□□□□□ -0.08
CDH11P55287 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH11P55287 AC105339.1-204ENST00000636249 355 ntBASIC14.55□□□□□ -0.08
CDH11P55287 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH11P55287 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH11P55287 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.55□□□□□ -0.08
CDH11P55287 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.55□□□□□ -0.08
CDH11P55287 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CDH11P55287 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH11P55287 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH11P55287 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CDH11P55287 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
CDH11P55287 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
CDH11P55287 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
CDH11P55287 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH11P55287 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
CDH11P55287 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
CDH11P55287 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms