Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CACNB3P54284 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CACNB3P54284 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CACNB3P54284 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CACNB3P54284 AL590640.2-201ENST00000457038 527 ntBASIC18.57■□□□□ 0.56
CACNB3P54284 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC18.57■□□□□ 0.56
CACNB3P54284 EMC4-209ENST00000559421 497 ntTSL 2 BASIC18.57■□□□□ 0.56
CACNB3P54284 C2orf69P2-201ENST00000562032 1123 ntBASIC18.57■□□□□ 0.56
CACNB3P54284 DERL2-202ENST00000570848 657 ntTSL 5 BASIC18.57■□□□□ 0.56
CACNB3P54284 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CACNB3P54284 MIR3615-201ENST00000581999 87 ntBASIC18.57■□□□□ 0.56
CACNB3P54284 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC18.57■□□□□ 0.56
CACNB3P54284 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC18.57■□□□□ 0.56
CACNB3P54284 AC008687.7-202ENST00000637404 953 ntBASIC18.57■□□□□ 0.56
CACNB3P54284 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CACNB3P54284 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CACNB3P54284 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CACNB3P54284 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CACNB3P54284 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.57■□□□□ 0.56
CACNB3P54284 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC18.57■□□□□ 0.56
CACNB3P54284 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CACNB3P54284 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CACNB3P54284 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
CACNB3P54284 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.57■□□□□ 0.56
CACNB3P54284 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.57■□□□□ 0.56
CACNB3P54284 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
CACNB3P54284 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CACNB3P54284 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CACNB3P54284 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CACNB3P54284 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CACNB3P54284 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CACNB3P54284 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CACNB3P54284 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CACNB3P54284 MIR326-201ENST00000362220 95 ntBASIC18.56■□□□□ 0.56
CACNB3P54284 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CACNB3P54284 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CACNB3P54284 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC18.56■□□□□ 0.56
CACNB3P54284 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CACNB3P54284 AC079316.1-201ENST00000548397 411 ntBASIC18.56■□□□□ 0.56
CACNB3P54284 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC18.56■□□□□ 0.56
CACNB3P54284 HNRNPA1P48-202ENST00000565308 961 ntBASIC18.56■□□□□ 0.56
CACNB3P54284 UBL5-208ENST00000593087 320 ntTSL 3 BASIC18.56■□□□□ 0.56
CACNB3P54284 AC091271.1-201ENST00000611877 1162 ntBASIC18.56■□□□□ 0.56
CACNB3P54284 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC18.56■□□□□ 0.56
CACNB3P54284 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CACNB3P54284 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC18.56■□□□□ 0.56
CACNB3P54284 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CACNB3P54284 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.56■□□□□ 0.56
CACNB3P54284 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CACNB3P54284 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CACNB3P54284 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC18.56■□□□□ 0.56
CACNB3P54284 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CACNB3P54284 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CACNB3P54284 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CACNB3P54284 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CACNB3P54284 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
CACNB3P54284 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CACNB3P54284 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.56■□□□□ 0.56
CACNB3P54284 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CACNB3P54284 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CACNB3P54284 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.56■□□□□ 0.56
CACNB3P54284 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.56■□□□□ 0.56
CACNB3P54284 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.56■□□□□ 0.56
CACNB3P54284 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CACNB3P54284 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CACNB3P54284 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC18.55■□□□□ 0.56
CACNB3P54284 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CACNB3P54284 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CACNB3P54284 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CACNB3P54284 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CACNB3P54284 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.55■□□□□ 0.56
CACNB3P54284 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC18.55■□□□□ 0.56
CACNB3P54284 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC18.55■□□□□ 0.56
CACNB3P54284 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CACNB3P54284 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CACNB3P54284 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.55■□□□□ 0.56
CACNB3P54284 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.55■□□□□ 0.56
CACNB3P54284 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CACNB3P54284 AL138799.1-201ENST00000448213 1675 ntBASIC18.55■□□□□ 0.56
CACNB3P54284 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CACNB3P54284 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC18.55■□□□□ 0.56
CACNB3P54284 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CACNB3P54284 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CACNB3P54284 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC18.55■□□□□ 0.56
CACNB3P54284 PFN1P12-201ENST00000455938 534 ntBASIC18.55■□□□□ 0.56
CACNB3P54284 FAM86HP-204ENST00000513466 959 ntBASIC18.55■□□□□ 0.56
CACNB3P54284 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
CACNB3P54284 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC18.55■□□□□ 0.56
CACNB3P54284 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC18.55■□□□□ 0.56
CACNB3P54284 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CACNB3P54284 AC084346.2-201ENST00000607097 949 ntBASIC18.55■□□□□ 0.56
CACNB3P54284 ABBA01031663.1-201ENST00000635630 790 ntBASIC18.55■□□□□ 0.56
CACNB3P54284 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CACNB3P54284 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CACNB3P54284 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CACNB3P54284 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CACNB3P54284 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CACNB3P54284 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC18.55■□□□□ 0.56
CACNB3P54284 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CACNB3P54284 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms