Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CLCN4P51793 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CLCN4P51793 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC16.53■□□□□ 0.24
CLCN4P51793 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN4P51793 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN4P51793 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN4P51793 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN4P51793 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC16.53■□□□□ 0.24
CLCN4P51793 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CLCN4P51793 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CLCN4P51793 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLCN4P51793 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLCN4P51793 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLCN4P51793 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLCN4P51793 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.52■□□□□ 0.24
CLCN4P51793 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLCN4P51793 AC006449.5-201ENST00000610658 2098 ntBASIC16.52■□□□□ 0.24
CLCN4P51793 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CLCN4P51793 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.52■□□□□ 0.24
CLCN4P51793 AC018892.3-201ENST00000623986 2499 ntBASIC16.52■□□□□ 0.24
CLCN4P51793 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLCN4P51793 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLCN4P51793 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC16.52■□□□□ 0.24
CLCN4P51793 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.52■□□□□ 0.24
CLCN4P51793 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.52■□□□□ 0.24
CLCN4P51793 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CLCN4P51793 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
CLCN4P51793 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLCN4P51793 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.52■□□□□ 0.24
CLCN4P51793 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
CLCN4P51793 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC16.52■□□□□ 0.24
CLCN4P51793 EMC4-209ENST00000559421 497 ntTSL 2 BASIC16.52■□□□□ 0.24
CLCN4P51793 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.52■□□□□ 0.24
CLCN4P51793 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLCN4P51793 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CLCN4P51793 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CLCN4P51793 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.52■□□□□ 0.24
CLCN4P51793 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLCN4P51793 AC011270.2-201ENST00000624293 2550 ntBASIC16.52■□□□□ 0.23
CLCN4P51793 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CLCN4P51793 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.52■□□□□ 0.23
CLCN4P51793 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLCN4P51793 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC16.52■□□□□ 0.23
CLCN4P51793 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CLCN4P51793 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLCN4P51793 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CLCN4P51793 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CLCN4P51793 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCN4P51793 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCN4P51793 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
CLCN4P51793 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLCN4P51793 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.51■□□□□ 0.23
CLCN4P51793 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CLCN4P51793 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.51■□□□□ 0.23
CLCN4P51793 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CLCN4P51793 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCN4P51793 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLCN4P51793 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.51■□□□□ 0.23
CLCN4P51793 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.51■□□□□ 0.23
CLCN4P51793 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.51■□□□□ 0.23
CLCN4P51793 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.51■□□□□ 0.23
CLCN4P51793 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC16.51■□□□□ 0.23
CLCN4P51793 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.51■□□□□ 0.23
CLCN4P51793 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.51■□□□□ 0.23
CLCN4P51793 AC015910.1-201ENST00000579400 975 ntBASIC16.51■□□□□ 0.23
CLCN4P51793 AC243960.2-201ENST00000600996 747 ntBASIC16.51■□□□□ 0.23
CLCN4P51793 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.51■□□□□ 0.23
CLCN4P51793 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CLCN4P51793 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CLCN4P51793 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC16.51■□□□□ 0.23
CLCN4P51793 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCN4P51793 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLCN4P51793 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.51■□□□□ 0.23
CLCN4P51793 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CLCN4P51793 TNRC18P3-201ENST00000441896 2691 ntBASIC16.51■□□□□ 0.23
CLCN4P51793 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.51■□□□□ 0.23
CLCN4P51793 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CLCN4P51793 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CLCN4P51793 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN4P51793 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN4P51793 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN4P51793 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CLCN4P51793 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN4P51793 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.5■□□□□ 0.23
CLCN4P51793 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN4P51793 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN4P51793 CYP2T1P-202ENST00000641596 2535 ntBASIC16.5■□□□□ 0.23
CLCN4P51793 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN4P51793 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.5■□□□□ 0.23
CLCN4P51793 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN4P51793 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN4P51793 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN4P51793 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.5■□□□□ 0.23
CLCN4P51793 AL133267.1-201ENST00000398220 340 ntBASIC16.5■□□□□ 0.23
CLCN4P51793 MIR1247-201ENST00000408206 136 ntBASIC16.5■□□□□ 0.23
CLCN4P51793 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.5■□□□□ 0.23
CLCN4P51793 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CLCN4P51793 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.5■□□□□ 0.23
CLCN4P51793 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.5■□□□□ 0.23
CLCN4P51793 AP001582.1-201ENST00000525856 295 ntBASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms