Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 AC009090.5-201ENST00000624886 2285 ntBASIC14.77□□□□□ -0.04
RNF144AP50876 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RNF144AP50876 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.77□□□□□ -0.04
RNF144AP50876 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNF144AP50876 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RNF144AP50876 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
RNF144AP50876 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.77□□□□□ -0.04
RNF144AP50876 AL691432.1-201ENST00000596308 1422 ntBASIC14.77□□□□□ -0.04
RNF144AP50876 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.77□□□□□ -0.04
RNF144AP50876 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RNF144AP50876 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNF144AP50876 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RNF144AP50876 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNF144AP50876 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNF144AP50876 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
RNF144AP50876 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNF144AP50876 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNF144AP50876 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.77□□□□□ -0.04
RNF144AP50876 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.77□□□□□ -0.04
RNF144AP50876 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
RNF144AP50876 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF144AP50876 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF144AP50876 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RNF144AP50876 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.77□□□□□ -0.05
RNF144AP50876 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.77□□□□□ -0.05
RNF144AP50876 AC023141.5-201ENST00000458585 616 ntBASIC14.77□□□□□ -0.05
RNF144AP50876 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RNF144AP50876 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.77□□□□□ -0.05
RNF144AP50876 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RNF144AP50876 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.77□□□□□ -0.05
RNF144AP50876 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC14.77□□□□□ -0.05
RNF144AP50876 MIR6080-201ENST00000617359 66 ntBASIC14.77□□□□□ -0.05
RNF144AP50876 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.77□□□□□ -0.05
RNF144AP50876 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RNF144AP50876 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF144AP50876 AC136621.1-201ENST00000624017 2304 ntBASIC14.77□□□□□ -0.05
RNF144AP50876 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RNF144AP50876 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RNF144AP50876 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF144AP50876 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF144AP50876 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
RNF144AP50876 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
RNF144AP50876 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.77□□□□□ -0.05
RNF144AP50876 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.77□□□□□ -0.05
RNF144AP50876 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF144AP50876 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF144AP50876 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.76□□□□□ -0.05
RNF144AP50876 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.76□□□□□ -0.05
RNF144AP50876 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF144AP50876 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.76□□□□□ -0.05
RNF144AP50876 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF144AP50876 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RNF144AP50876 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF144AP50876 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF144AP50876 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF144AP50876 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.76□□□□□ -0.05
RNF144AP50876 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF144AP50876 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RNF144AP50876 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF144AP50876 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF144AP50876 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.76□□□□□ -0.05
RNF144AP50876 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF144AP50876 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF144AP50876 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF144AP50876 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
RNF144AP50876 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.76□□□□□ -0.05
RNF144AP50876 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF144AP50876 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RNF144AP50876 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF144AP50876 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC14.76□□□□□ -0.05
RNF144AP50876 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.76□□□□□ -0.05
RNF144AP50876 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF144AP50876 MTND6P24-201ENST00000440466 518 ntBASIC14.76□□□□□ -0.05
RNF144AP50876 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF144AP50876 AC109322.1-201ENST00000524499 1264 ntBASIC14.76□□□□□ -0.05
RNF144AP50876 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RNF144AP50876 MIR4453-201ENST00000584019 89 ntBASIC14.76□□□□□ -0.05
RNF144AP50876 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.76□□□□□ -0.05
RNF144AP50876 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.76□□□□□ -0.05
RNF144AP50876 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF144AP50876 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF144AP50876 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF144AP50876 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF144AP50876 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RNF144AP50876 CYP4F24P-201ENST00000586049 1580 ntBASIC14.76□□□□□ -0.05
RNF144AP50876 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.76□□□□□ -0.05
RNF144AP50876 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF144AP50876 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
RNF144AP50876 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF144AP50876 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.76□□□□□ -0.05
RNF144AP50876 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF144AP50876 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF144AP50876 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF144AP50876 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
RNF144AP50876 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.76□□□□□ -0.05
RNF144AP50876 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RNF144AP50876 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RNF144AP50876 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
RNF144AP50876 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
RNF144AP50876 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms