Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF4P48230 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TM4SF4P48230 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF4P48230 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF4P48230 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF4P48230 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
TM4SF4P48230 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF4P48230 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF4P48230 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF4P48230 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF4P48230 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF4P48230 RPL7P35-201ENST00000446943 740 ntBASIC17.64■□□□□ 0.41
TM4SF4P48230 EHF-205ENST00000527935 557 ntTSL 2 BASIC17.64■□□□□ 0.41
TM4SF4P48230 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC17.64■□□□□ 0.41
TM4SF4P48230 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TM4SF4P48230 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.64■□□□□ 0.41
TM4SF4P48230 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC17.64■□□□□ 0.41
TM4SF4P48230 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.64■□□□□ 0.41
TM4SF4P48230 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC17.64■□□□□ 0.41
TM4SF4P48230 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC17.64■□□□□ 0.41
TM4SF4P48230 AL132994.2-201ENST00000603120 687 ntBASIC17.64■□□□□ 0.41
TM4SF4P48230 MIR6842-201ENST00000612539 65 ntBASIC17.64■□□□□ 0.41
TM4SF4P48230 YRDCP1-201ENST00000621419 643 ntBASIC17.64■□□□□ 0.41
TM4SF4P48230 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC17.64■□□□□ 0.41
TM4SF4P48230 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF4P48230 AC139713.2-201ENST00000641328 2723 ntBASIC17.64■□□□□ 0.41
TM4SF4P48230 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF4P48230 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF4P48230 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF4P48230 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF4P48230 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF4P48230 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TM4SF4P48230 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.64■□□□□ 0.41
TM4SF4P48230 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF4P48230 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC17.64■□□□□ 0.41
TM4SF4P48230 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TM4SF4P48230 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TM4SF4P48230 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.64■□□□□ 0.41
TM4SF4P48230 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.63■□□□□ 0.41
TM4SF4P48230 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TM4SF4P48230 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TM4SF4P48230 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TM4SF4P48230 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.63■□□□□ 0.41
TM4SF4P48230 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TM4SF4P48230 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TM4SF4P48230 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC17.63■□□□□ 0.41
TM4SF4P48230 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TM4SF4P48230 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.63■□□□□ 0.41
TM4SF4P48230 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TM4SF4P48230 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC17.63■□□□□ 0.41
TM4SF4P48230 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC17.63■□□□□ 0.41
TM4SF4P48230 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TM4SF4P48230 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC17.63■□□□□ 0.41
TM4SF4P48230 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC17.63■□□□□ 0.41
TM4SF4P48230 MESTP3-201ENST00000503460 968 ntBASIC17.63■□□□□ 0.41
TM4SF4P48230 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TM4SF4P48230 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.63■□□□□ 0.41
TM4SF4P48230 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC17.63■□□□□ 0.41
TM4SF4P48230 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC17.63■□□□□ 0.41
TM4SF4P48230 AC005357.2-202ENST00000590507 1060 ntBASIC17.63■□□□□ 0.41
TM4SF4P48230 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC17.63■□□□□ 0.41
TM4SF4P48230 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TM4SF4P48230 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC17.63■□□□□ 0.41
TM4SF4P48230 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
TM4SF4P48230 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TM4SF4P48230 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TM4SF4P48230 CLUHP2-201ENST00000426660 1303 ntBASIC17.63■□□□□ 0.41
TM4SF4P48230 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TM4SF4P48230 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TM4SF4P48230 TBC1D3J-201ENST00000620719 1426 ntBASIC17.63■□□□□ 0.41
TM4SF4P48230 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TM4SF4P48230 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
TM4SF4P48230 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TM4SF4P48230 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TM4SF4P48230 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.62■□□□□ 0.41
TM4SF4P48230 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF4P48230 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF4P48230 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF4P48230 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.62■□□□□ 0.41
TM4SF4P48230 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF4P48230 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF4P48230 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF4P48230 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF4P48230 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF4P48230 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.62■□□□□ 0.41
TM4SF4P48230 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
TM4SF4P48230 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF4P48230 AC097065.1-201ENST00000425737 517 ntBASIC17.62■□□□□ 0.41
TM4SF4P48230 GHSR-202ENST00000427970 912 ntBASIC17.62■□□□□ 0.41
TM4SF4P48230 AC073150.1-201ENST00000450406 1084 ntBASIC17.62■□□□□ 0.41
TM4SF4P48230 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.62■□□□□ 0.41
TM4SF4P48230 AC090857.1-201ENST00000527400 390 ntBASIC17.62■□□□□ 0.41
TM4SF4P48230 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF4P48230 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC17.62■□□□□ 0.41
TM4SF4P48230 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC17.62■□□□□ 0.41
TM4SF4P48230 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF4P48230 IRF3-215ENST00000596822 823 ntTSL 3 BASIC17.62■□□□□ 0.41
TM4SF4P48230 AC009955.4-201ENST00000597192 544 ntBASIC17.62■□□□□ 0.41
TM4SF4P48230 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TM4SF4P48230 NAP1L6-202ENST00000641404 1222 ntBASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms