Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
TNFSF9P41273 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TNFSF9P41273 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TNFSF9P41273 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TNFSF9P41273 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNFSF9P41273 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.02■□□□□ 0.32
TNFSF9P41273 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.02■□□□□ 0.32
TNFSF9P41273 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.02■□□□□ 0.32
TNFSF9P41273 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNFSF9P41273 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNFSF9P41273 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNFSF9P41273 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TNFSF9P41273 TK1-203ENST00000588734 1681 ntTSL 2 BASIC17.02■□□□□ 0.32
TNFSF9P41273 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TNFSF9P41273 COPE-202ENST00000349893 948 ntTSL 2 BASIC17.02■□□□□ 0.32
TNFSF9P41273 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNFSF9P41273 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
TNFSF9P41273 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.02■□□□□ 0.32
TNFSF9P41273 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.02■□□□□ 0.32
TNFSF9P41273 KRT18P43-201ENST00000469825 1281 ntBASIC17.02■□□□□ 0.32
TNFSF9P41273 FAM86LP-201ENST00000478302 853 ntBASIC17.02■□□□□ 0.32
TNFSF9P41273 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC17.02■□□□□ 0.32
TNFSF9P41273 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.02■□□□□ 0.32
TNFSF9P41273 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.02■□□□□ 0.32
TNFSF9P41273 AL596325.1-201ENST00000563991 1082 ntBASIC17.02■□□□□ 0.32
TNFSF9P41273 RRP7BP-205ENST00000566851 833 ntBASIC17.02■□□□□ 0.32
TNFSF9P41273 AC036164.1-201ENST00000570544 333 ntBASIC17.02■□□□□ 0.32
TNFSF9P41273 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.02■□□□□ 0.32
TNFSF9P41273 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.02■□□□□ 0.32
TNFSF9P41273 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.02■□□□□ 0.32
TNFSF9P41273 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNFSF9P41273 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
TNFSF9P41273 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TNFSF9P41273 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TNFSF9P41273 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.02■□□□□ 0.31
TNFSF9P41273 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC17.02■□□□□ 0.31
TNFSF9P41273 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TNFSF9P41273 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TNFSF9P41273 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
TNFSF9P41273 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.31
TNFSF9P41273 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
TNFSF9P41273 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.02■□□□□ 0.31
TNFSF9P41273 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.02■□□□□ 0.31
TNFSF9P41273 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.02■□□□□ 0.31
TNFSF9P41273 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
TNFSF9P41273 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFSF9P41273 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.01■□□□□ 0.31
TNFSF9P41273 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TNFSF9P41273 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TNFSF9P41273 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TNFSF9P41273 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFSF9P41273 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TNFSF9P41273 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFSF9P41273 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFSF9P41273 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFSF9P41273 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TNFSF9P41273 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.01■□□□□ 0.31
TNFSF9P41273 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
TNFSF9P41273 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFSF9P41273 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFSF9P41273 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFSF9P41273 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
TNFSF9P41273 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFSF9P41273 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFSF9P41273 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFSF9P41273 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFSF9P41273 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
TNFSF9P41273 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
TNFSF9P41273 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TNFSF9P41273 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.01■□□□□ 0.31
TNFSF9P41273 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.01■□□□□ 0.31
TNFSF9P41273 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.01■□□□□ 0.31
TNFSF9P41273 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TNFSF9P41273 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TNFSF9P41273 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
TNFSF9P41273 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TNFSF9P41273 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
TNFSF9P41273 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.01■□□□□ 0.31
TNFSF9P41273 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TNFSF9P41273 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.01■□□□□ 0.31
TNFSF9P41273 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.01■□□□□ 0.31
TNFSF9P41273 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.01■□□□□ 0.31
TNFSF9P41273 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFSF9P41273 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TNFSF9P41273 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TNFSF9P41273 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.01■□□□□ 0.31
TNFSF9P41273 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TNFSF9P41273 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFSF9P41273 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TNFSF9P41273 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TNFSF9P41273 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
TNFSF9P41273 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFSF9P41273 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TNFSF9P41273 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TNFSF9P41273 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.01■□□□□ 0.31
TNFSF9P41273 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
TNFSF9P41273 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TNFSF9P41273 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TNFSF9P41273 CYP2AB1P-202ENST00000454440 1456 ntBASIC17■□□□□ 0.31
TNFSF9P41273 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms